RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MFSD3Q96ES6 412 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 SOX17Q9H6I2 414 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 ZNF552Q9H707 407 aaPredicted RBP14.61□□□□□ -0.07
LIMS3-203ENST00000480744 FBXL4Q9UKA2 621 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 B3GNT3Q9Y2A9 372 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 ZKSCAN5Q9Y2L8 839 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 FAM169AQ9Y6X4 670 aa14.61□□□□□ -0.07
LIMS3-203ENST00000480744 A0A0J9YVX5 310 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 PFDN6O15212 129 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CTSVO60911 334 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 IPO13O94829 963 aaKnown RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 EIF2S1P05198 315 aaKnown RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CCDC175P0C221 793 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 MMP11P24347 488 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 ARNTP27540 789 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CCNFP41002 786 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 OR1D4P47884 311 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 VPS41P49754 854 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 NKG7Q16617 165 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 WASHC2DQ5SRD0 308 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 YOD1Q5VVQ6 348 aaPredicted RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 HIST2H2BCQ6DN03 193 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 LRRC8BQ6P9F7 803 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 ZADH2Q8N4Q0 377 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 DTWD1Q8N5C7 304 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CISD2Q8N5K1 135 aaKnown RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 MAGEC3Q8TD91 643 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 SSC4DQ8WTU2 575 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 ZUFSPQ96AP4 578 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 SNRNP40Q96DI7 357 aaKnown RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 KIFC1Q9BW19 673 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 MRM3Q9HC36 420 aaKnown RBP14.6□□□□□ -0.07
LIMS3-203ENST00000480744 SLC6A20Q9NP91 592 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CTSFQ9UBX1 484 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 CRYL1Q9Y2S2 319 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 MAU2Q9Y6X3 613 aa14.6□□□□□ -0.07
LIMS3-203ENST00000480744 TCRBV7S3A2A0A539 114 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 TARM1B6A8C7 271 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 PRICKLE3O43900 615 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 NRP2O60462 931 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 FKBP9O95302 570 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 ALBP02768 609 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 TPSB2P20231 275 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 CHRM3P20309 590 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 CXCR5P32302 372 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 AIMP2Q13155 320 aaKnown RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 TSTA3Q13630 321 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 NR6A1Q15406 480 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 TPSAB1Q15661 275 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 RBBP7Q16576 425 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 FAM214AQ32MH5 1076 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 C4orf17Q53FE4 359 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 RNF187Q5TA31 235 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 IRAK1BP1Q5VVH5 260 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 FRMPD2BQ6IN97 320 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 CASC4Q6P4E1 433 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 COX15Q7KZN9 410 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 OR2L3Q8NG85 312 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 LPGAT1Q92604 370 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 PDLIM2Q96JY6 352 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 BIRC8Q96P09 236 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 SPSB2Q99619 263 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 ACAT2Q9BWD1 397 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 KCNF1Q9H3M0 494 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 WDR54Q9H977 334 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 ZBTB20Q9HC78 741 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 ASF1BQ9NVP2 202 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 SPATA7Q9P0W8 599 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 PLEKHB1Q9UF11 243 aaPredicted RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 ZC3H7BQ9UGR2 993 aaKnown RBP14.59□□□□□ -0.07
LIMS3-203ENST00000480744 SOX13Q9UN79 622 aa14.59□□□□□ -0.07
LIMS3-203ENST00000480744 CNTRLQ7Z7A1 2325 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 HYKKA2RU49 373 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 E5RI56 91 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 H3BMM5 538 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 SOCS6O14544 535 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 SRPX2O60687 465 aaPredicted RBP14.58□□□□□ -0.08
LIMS3-203ENST00000480744 AVILO75366 819 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 ERVK-10P10266 1014 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 CMPK1P30085 196 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 GLRBP48167 497 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 CDK16Q00536 496 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 FASTKQ14296 549 aaKnown RBP14.58□□□□□ -0.08
LIMS3-203ENST00000480744 TYSND1Q2T9J0 566 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 PRAMEF13Q5VWM6 474 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 IGFL3Q6UXB1 125 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 PARP9Q8IXQ6 854 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 PRSS58Q8IYP2 241 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 OR2A1Q8NGT9 310 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 HMGCLL1Q8TB92 370 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 ZNF285Q96NJ3 590 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 SAMD15Q9P1V8 674 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 STOX2Q9P2F5 926 aaPredicted RBP14.58□□□□□ -0.08
LIMS3-203ENST00000480744 NXT1Q9UKK6 140 aaKnown RBP14.58□□□□□ -0.08
LIMS3-203ENST00000480744 HS3ST3B1Q9Y662 390 aa14.58□□□□□ -0.08
LIMS3-203ENST00000480744 LOC105369274A0A096LPK9 316 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 LOC102723532A0A0G2JNH3 316 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 A0A1W2PPV9 198 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 A1L4Q6 167 aa14.57□□□□□ -0.08
LIMS3-203ENST00000480744 FITM1A5D6W6 292 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms