RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 KPNA2P52292 529 aaKnown RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 GPLD1P80108 840 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 E2F1Q01094 437 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 NAE1Q13564 534 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 PCBP2Q15366 365 aaKnown RBP eCLIP9.27□□□□□ -0.934e-15■□□□□ 11.1
CD46-214ENST00000480003 NR6A1Q15406 480 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 CLPPQ16740 277 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 C18orf21Q32NC0 220 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 NKAIN2Q5VXU1 208 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ANKS6Q68DC2 871 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ZNF574Q6ZN55 896 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 Q8N9G6 341 aaPredicted RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 DEFB124Q8NES8 71 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 OR2A1Q8NGT9 310 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ATL1Q8WXF7 558 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SMPDL3AQ92484 453 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SCYL1Q96KG9 808 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 TSNARE1Q96NA8 513 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 CCDC3Q9BQI4 270 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SGPP1Q9BX95 441 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 RAB11FIP5Q9BXF6 653 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ATG10Q9H0Y0 220 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ABCG4Q9H172 646 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SLC32A1Q9H598 525 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 HRASLS2Q9NWW9 162 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SPHK1Q9NYA1 384 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 KCNK4Q9NYG8 393 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 NUDT4Q9NZJ9 180 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 CPSF2Q9P2I0 782 aaKnown RBP9.27□□□□□ -0.93
CD46-214ENST00000480003 SLC17A7Q9P2U7 560 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 XPR1Q9UBH6 696 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 ENTPD2Q9Y5L3 495 aa9.27□□□□□ -0.93
CD46-214ENST00000480003 SPTBN4Q9H254 2564 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 ZNF839A8K0R7 811 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 HMGB1P1B2RPK0 211 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 STX16-NPEPL1H3BU86 382 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 STX16O14662 325 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 ZW10O43264 779 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 C9P02748 559 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 TYRP1P17643 537 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 POLR2CP19387 275 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 IMPDH1P20839 514 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 ATP5F1P24539 256 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 OAS2P29728 719 aaKnown RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 PRDX3P30048 256 aaKnown RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 AGTR2P50052 363 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 PRKAA2P54646 552 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 PCDH1Q08174 1060 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 BIRC2Q13490 618 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 RSPO4Q2I0M5 234 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 PTCHD3Q3KNS1 767 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 METTL2BQ6P1Q9 378 aaKnown RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 TMEM71Q6P5X7 295 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 KLHL35Q6PF15 583 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 WDR74Q6RFH5 385 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 ZYG11AQ6WRX3 759 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 USP53Q70EK8 1073 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 TMPRSS9Q7Z410 1059 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 TCAIMQ8N3R3 496 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 C2orf73Q8N5S3 287 aaPredicted RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 PPFIBP2Q8ND30 876 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 OR10G6Q8NH81 332 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 UBTD2Q8WUN7 234 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 NCSTNQ92542 709 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 RSC1A1Q92681 617 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 ESAMQ96AP7 390 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 FAM111AQ96PZ2 611 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 OR2A14Q96R47 310 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 DPYSL5Q9BPU6 564 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 TMEM79Q9BSE2 394 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 RTKNQ9BST9 563 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 C1QTNF3Q9BXJ4 246 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 CD244Q9BZW8 370 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 ACBD3Q9H3P7 528 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 OXSMQ9NWU1 459 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 CD274Q9NZQ7 290 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 TMCO1Q9UM00 188 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 PCM1Q15154 2024 aa9.26□□□□□ -0.93
CD46-214ENST00000480003 CNOT1A5YKK6 2376 aaKnown RBP9.26□□□□□ -0.93
CD46-214ENST00000480003 FRYLO94915 3013 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 ZNF292O60281 2723 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 PIPSLA2A3N6 862 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 NCF1BA6NI72 391 aaPredicted RBP9.25□□□□□ -0.93
CD46-214ENST00000480003 A8MT66 165 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 NCF1CA8MVU1 366 aaPredicted RBP9.25□□□□□ -0.93
CD46-214ENST00000480003 MATN2O00339 956 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 GIPC1O14908 333 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 TM9SF1O15321 606 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 WIPF1O43516 503 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 STK16O75716 305 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 IPO13O94829 963 aaKnown RBP9.25□□□□□ -0.93
CD46-214ENST00000480003 FKBP9O95302 570 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 CPNE6O95741 557 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 CDK4P11802 303 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 NCF1P14598 390 aaPredicted RBP9.25□□□□□ -0.93
CD46-214ENST00000480003 CPA3P15088 417 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 TAC1P20366 129 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 GDF5P43026 501 aa9.25□□□□□ -0.93
CD46-214ENST00000480003 CAPZBP47756 277 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms