RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ZDHHC18	Q9NUE0	388 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	PCMTD2	Q9NV79	361 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	TEX264	Q9Y6I9	313 aa		15.04	■□□□□ -0
HDLBP-238	ENST00000479894	AGAP14	A8MT82	685 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894		C9J4A7	227 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	PEX12	O00623	359 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	TP73	O15350	636 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	DIAPH2	O60879	1101 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	VAPB	O95292	243 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	PHB	P35232	272 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	TMPRSS15	P98073	1019 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	ITIH4	Q14624	930 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	CRTC3	Q6UUV7	619 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	ZDHHC24	Q6UX98	284 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	CYS1	Q717R9	158 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	TAS2R42	Q7RTR8	314 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	ZNF295-AS1	Q8N0V1	137 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	ZNF808	Q8N4W9	903 aa	Predicted RBP	15.03	■□□□□ -0
HDLBP-238	ENST00000479894	OTUD6B	Q8N6M0	293 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	CDKL2	Q92772	493 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	ZNF669	Q96BR6	464 aa	Predicted RBP	15.03	■□□□□ -0
HDLBP-238	ENST00000479894	COPS8	Q99627	209 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	C17orf62	Q9BQA9	187 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	VPS37B	Q9H9H4	285 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	CATSPERZ	Q9NTU4	200 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	NSMCE4A	Q9NXX6	385 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894	SUCO	Q9UBS9	1254 aa	Known RBP	15.03	■□□□□ -0
HDLBP-238	ENST00000479894	DNAJC16	Q9Y2G8	782 aa		15.03	■□□□□ -0
HDLBP-238	ENST00000479894		A0A1B0GTL3	188 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	CCDC162P	A2VCL2	907 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	CD3EAP	O15446	510 aa	Known RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	KCNJ13	O60928	360 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	GSTM1	P09488	218 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	MSL3P1	P0C860	447 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	HOXB4	P17483	251 aa	Predicted RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	VCL	P18206	1134 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	MSH3	P20585	1137 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	NMBR	P28336	390 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	OTX2	P32243	289 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	HAL	P42357	657 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	MAGEA4	P43358	317 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	ARCN1	P48444	511 aa	Known RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	XIAP	P98170	497 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	GSTM4	Q03013	218 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	ABR	Q12979	859 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	PLA2G4E	Q3MJ16	856 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	ATP13A5	Q4VNC0	1218 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	NEPRO	Q6NW34	567 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	MTFR2	Q6P444	385 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	IGFL2	Q6UWQ7	119 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	RPTN	Q6XPR3	784 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	LRRC6	Q86X45	466 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	FBXO36	Q8NEA4	188 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	DDHD1	Q8NEL9	900 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	GPR150	Q8NGU9	434 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	GSDMB	Q8TAX9	411 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	MFSD3	Q96ES6	412 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	TSSK1B	Q9BXA7	367 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	ACTR5	Q9H9F9	607 aa	Predicted RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	ZBTB20	Q9HC78	741 aa	Predicted RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	C20orf96	Q9NUD7	363 aa	Predicted RBP	15.02	■□□□□ -0
HDLBP-238	ENST00000479894	CHMP2B	Q9UQN3	213 aa		15.02	■□□□□ -0
HDLBP-238	ENST00000479894	TRBV5-4	A0A0C4DH59	114 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	OR5K3	A6NET4	321 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	NDUFS3	O75489	264 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	KLF7	O75840	302 aa	Predicted RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	AP2A2	O94973	939 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	GOT2	P00505	430 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	SNRPB2	P08579	225 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CD63	P08962	238 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CD1E	P15812	388 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	OGN	P20774	298 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	AKT1	P31749	480 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	STX2	P32856	288 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CARS	P49589	748 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CRYM	Q14894	314 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	MSS51	Q4VC12	460 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	PRAMEF17	Q5VTA0	474 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	STEAP4	Q687X5	459 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	WDR93	Q6P2C0	686 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	KIAA0408	Q6ZU52	694 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	TRMT10C	Q7L0Y3	403 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	MRGPRG	Q86SM5	289 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CDH24	Q86UP0	819 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	OOSP2	Q86WS3	158 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	ZNF547	Q8IVP9	402 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	CFAP36	Q96G28	342 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	ATP13A2	Q9NQ11	1180 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	PPAN	Q9NQ55	473 aa	Known RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	ZDHHC3	Q9NYG2	299 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	NFU1	Q9UMS0	254 aa		15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	15.01	□□□□□ -0.01
HDLBP-238	ENST00000479894	ZCWPW2	A0A1B0GU75	182 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894	CCDC78	A2IDD5	438 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894		H3BMM5	538 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894	PRICKLE3	O43900	615 aa	Predicted RBP	15	□□□□□ -0.01
HDLBP-238	ENST00000479894	JRK	O75564	520 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894	CDK14	O94921	469 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894	HBQ1	P09105	142 aa		15	□□□□□ -0.01
HDLBP-238	ENST00000479894	AGXT	P21549	392 aa		15	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms