RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 NLE1Q9NVX2 485 aaPredicted RBP15.35■□□□□ 0.05
DDX56-210ENST00000479440 HYOU1Q9Y4L1 999 aa15.35■□□□□ 0.05
DDX56-210ENST00000479440 SVILO95425 2214 aa15.35■□□□□ 0.05
DDX56-210ENST00000479440 IGLV3-12A0A075B6K2 115 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 IGHV1-45A0A0A0MS14 117 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 HYKKA2RU49 373 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 TARM1B6A8C7 271 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 BHMG1C9JSJ3 638 aaPredicted RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 APOC4-APOC2K7ER74 178 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 AKR1B10O60218 316 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 DIAPH2O60879 1101 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 APOC2P02655 101 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 ERVK-10P10266 1014 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 GRIA3P42263 894 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 VSX2P58304 361 aaPredicted RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 EEF1A2Q05639 463 aaKnown RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 SF1Q15637 639 aaKnown RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 ASTE1Q2TB18 679 aaPredicted RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 ARHGEF18Q6ZSZ5 1173 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 CDKL3Q8IVW4 592 aaPredicted RBP15.34■□□□□ 0.05
DDX56-210ENST00000479440 PIANPQ8IYJ0 282 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 OR2L8Q8NGY9 312 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 ZUFSPQ96AP4 578 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 ALS2CR12Q96Q35 445 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 ARNT2Q9HBZ2 717 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 TEKT2Q9UIF3 430 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 PRSS21Q9Y6M0 314 aa15.34■□□□□ 0.05
DDX56-210ENST00000479440 IDSB3KWA1 339 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 KIR3DL1P43629 444 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 EMP2P54851 167 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 PMP22Q01453 160 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 MUM1Q2TAK8 710 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 ANKRD20A2Q5SQ80 823 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 WASHC2DQ5SRD0 308 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 CCDC181Q5TID7 509 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 ANKRD20A1Q5TYW2 823 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 ANKRD20A3Q5VUR7 823 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 DENND5AQ6IQ26 1287 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 NAPRTQ6XQN6 538 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 SLC22A15Q8IZD6 547 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 DTWD1Q8N5C7 304 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 THAP3Q8WTV1 239 aaPredicted RBP15.33■□□□□ 0.04
DDX56-210ENST00000479440 STYXQ8WUJ0 223 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 MENTQ9BUN1 341 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 TSSK1BQ9BXA7 367 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 SLC39A10Q9ULF5 831 aa15.33■□□□□ 0.04
DDX56-210ENST00000479440 MACROD2A1Z1Q3 448 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 ZRANB2O95218 330 aaKnown RBP eCLIP15.32■□□□□ 0.04
DDX56-210ENST00000479440 ICAM2P13598 275 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 ZNF33BQ06732 778 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 NAA25Q14CX7 972 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 IQCB1Q15051 598 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 ZNF766Q5HY98 468 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 UNC5DQ6UXZ4 953 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 Q6ZPB1 254 aaPredicted RBP15.32■□□□□ 0.04
DDX56-210ENST00000479440 BBS12Q6ZW61 710 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 KATNAL2Q8IYT4 538 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 RAB42Q8N4Z0 105 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 C2orf73Q8N5S3 287 aaPredicted RBP15.32■□□□□ 0.04
DDX56-210ENST00000479440 CDKN2AIPNLQ96HQ2 116 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 CABS1Q96KC9 395 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 GPR137Q96N19 417 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 IL17FQ96PD4 163 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 TTC1Q99614 292 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 C10orf88Q9H8K7 445 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
DDX56-210ENST00000479440 IMPACTQ9P2X3 320 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 CDC14AQ9UNH5 594 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 ZNF835Q9Y2P0 537 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 MEMO1Q9Y316 297 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 CCDC168Q8NDH2 2452 aa15.32■□□□□ 0.04
DDX56-210ENST00000479440 CPAMD8Q8IZJ3 1885 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 MYO7BQ6PIF6 2116 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 CTSVO60911 334 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 ZNF189O75820 626 aaPredicted RBP15.31■□□□□ 0.04
DDX56-210ENST00000479440 HEXBP07686 556 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 ITGAMP11215 1152 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 MSNP26038 577 aaKnown RBP15.31■□□□□ 0.04
DDX56-210ENST00000479440 CSE1LP55060 971 aaKnown RBP15.31■□□□□ 0.04
DDX56-210ENST00000479440 SRSF11Q05519 484 aaKnown RBP15.31■□□□□ 0.04
DDX56-210ENST00000479440 DSG2Q14126 1118 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 KRTCAP3Q53RY4 240 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 TTC23LQ6PF05 361 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 MICALCLQ6ZW33 695 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 NEK10Q6ZWH5 1172 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 RNF44Q7L0R7 432 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 RCOR2Q8IZ40 523 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 EID3Q8N140 333 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 MVB12AQ96EY5 273 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 SPATA13Q96N96 652 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 YIPF2Q9BWQ6 316 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 ZC3H7BQ9UGR2 993 aaKnown RBP15.31■□□□□ 0.04
DDX56-210ENST00000479440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX56-210ENST00000479440 MED13LQ71F56 2210 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 PKDREJQ9NTG1 2253 aa15.31■□□□□ 0.04
DDX56-210ENST00000479440 FAM227AF5H4B4 570 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 TTI1O43156 1089 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 MED26O95402 600 aa15.3■□□□□ 0.04
DDX56-210ENST00000479440 EIF2S1P05198 315 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms