RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PRDM8Q9NQV8 689 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ABCG2Q9UNQ0 655 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 BTBD3Q9Y2F9 522 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 TRIM17Q9Y577 477 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 DYTNA2CJ06 578 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 PER2O15055 1255 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 NOL3O60936 208 aaKnown RBP10.51□□□□□ -0.73
VPS52-217ENST00000478934 FMO3P31513 532 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 DCTP40126 519 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ETV3P41162 512 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 GSSP48637 474 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 PPP2R2BQ00005 443 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 FPGSQ05932 587 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 TTLL9Q3SXZ7 439 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 BROXQ5VW32 411 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CEP68Q76N32 757 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CLECL1Q8IZS7 167 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 UBTD2Q8WUN7 234 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ASB11Q8WXH4 323 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 LMLNQ96KR4 655 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CCDC115Q96NT0 180 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 DOK1Q99704 481 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 OSBPL10Q9BXB5 764 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 UGT2B28Q9BY64 529 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 PCDH12Q9NPG4 1184 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 DCAF13Q9NV06 445 aaKnown RBP10.51□□□□□ -0.73
VPS52-217ENST00000478934 DNAJB9Q9UBS3 223 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CDH7Q9ULB5 785 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 SCN8AQ9UQD0 1980 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 GRXCR2A6NFK2 248 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 H0YAE9 185 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 hCG_2039718K7EN88 272 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CPNE6O95741 557 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 KRT6AP02538 564 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 FTH1P02794 183 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 KRT6BP04259 564 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 C7P10643 843 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 HTR1BP28222 390 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 PREPP48147 710 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 KRT6CP48668 564 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SNRPD1P62314 119 aaKnown RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 CHIT1Q13231 466 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 GTF2H3Q13889 308 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 TMEM215Q68D42 235 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 VTCN1Q7Z7D3 282 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CHPFQ8IZ52 775 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 UBE2FQ969M7 185 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CCDC138Q96M89 665 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 FUNDC2Q9BWH2 189 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 RDH14Q9HBH5 336 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 PRM3Q9NNZ6 103 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SPG21Q9NZD8 308 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 MYO1GB0I1T2 1018 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SGTAO43765 313 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ABCB7O75027 752 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 RFPL2O75678 378 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ETHE1O95571 254 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CPSF4O95639 269 aaKnown RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 BCL10O95999 233 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 EPHA2P29317 976 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 TGFBR1P36897 503 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 MAP2K4P45985 399 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 PPP3CCP48454 512 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SPINT3P49223 89 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CLDN8P56748 225 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 IL5RAQ01344 420 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CD300CQ08708 224 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ITGADQ13349 1161 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 RAPSNQ13702 412 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SMN1Q16637 294 aaKnown RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 C6orf141Q5SZD1 244 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 LAIR1Q6GTX8 287 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ZCCHC8Q6NZY4 707 aaKnown RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 CCDC81Q6ZN84 652 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 USP45Q70EL2 814 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CYP2U1Q7Z449 544 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 GPR149Q86SP6 731 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 PLPP6Q8IY26 295 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 CBARPQ8N350 705 aaPredicted RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 ZNF555Q8NEP9 628 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ELMO1Q92556 727 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 ZNF689Q96CS4 500 aaPredicted RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 ECHDC3Q96DC8 303 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 SLC12A9Q9BXP2 914 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 RNF208Q9H0X6 261 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 TMEFF2Q9UIK5 374 aaPredicted RBP10.5□□□□□ -0.73
VPS52-217ENST00000478934 CCDC88CQ9P219 2028 aa10.5□□□□□ -0.73
VPS52-217ENST00000478934 LOC100130705A0A1B0GUX0 176 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 TTC34A8MYJ7 566 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 SEC14L2O76054 403 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 LATS1O95835 1130 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 INHBBP09529 407 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 NUDT7P0C024 238 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 OR56A5P0C7T3 313 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 ATP1B2P14415 290 aaPredicted RBP10.49□□□□□ -0.73
VPS52-217ENST00000478934 PFN3P60673 137 aa10.49□□□□□ -0.73
VPS52-217ENST00000478934 MAD2L1Q13257 205 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms