RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SLC22A18Q96BI1 424 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 GJD2Q9UKL4 321 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 OAZ3Q9UMX2 235 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 COQ6Q9Y2Z9 468 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 HEBP2Q9Y5Z4 205 aa13.87□□□□□ -0.19
NPHP4-208ENST00000478423 RHPN2P1A8MT19 583 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 PDLIM1O00151 329 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 SDHDO14521 159 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ERI3O43414 337 aaKnown RBP13.86□□□□□ -0.19
NPHP4-208ENST00000478423 LDB2O43679 373 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 PRKD3O94806 890 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 DGKEP52429 567 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF155Q12901 538 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-208ENST00000478423 RAB30Q15771 203 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 RHEBL1Q8TAI7 183 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 FAM110BQ8TC76 370 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 KAT2AQ92830 837 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 SLC35G5Q96KT7 338 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 PALMDQ9NP74 551 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 RGS10O43665 173 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 MFN2O95140 757 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 GBAP04062 536 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TMEM25Q86YD3 366 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 FAM46DQ8NEK8 389 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 CNPPD1Q9BV87 410 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TMEM27Q9HBJ8 222 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 DMTF1Q9Y222 760 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 AXIN1O15169 862 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 GRID2O43424 1007 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 NOBOXO60393 691 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 NADKO95544 446 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ENGP17813 658 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 EMX2Q04743 252 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 PERM1Q5SV97 790 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TRNP1Q6NT89 227 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 BTBD1Q9H0C5 482 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 CXCL16Q9H2A7 254 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TPK1Q9H3S4 243 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TJP1Q07157 1748 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 LRRC14BA6NHZ5 514 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TPST2O60704 377 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 CHRM1P11229 460 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-208ENST00000478423 NDUFS1P28331 727 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 CDKN2DP55273 166 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ITPRIPL2Q3MIP1 535 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 SPIN4Q56A73 249 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 SAMD14Q8IZD0 417 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 TTLQ8NG68 377 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 OR5AK3PQ8NH89 298 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF563Q8TA94 476 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ENKURQ8TC29 256 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 GLYATL1Q969I3 302 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
NPHP4-208ENST00000478423 ANKRD36CQ5JPF3 1778 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CD247P20963 164 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 RHDQ02161 417 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CEP78Q5JTW2 689 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 PAQR9Q6ZVX9 377 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CADM2Q8N3J6 435 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 TTC29Q8NA56 475 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 TSTD1Q8NFU3 115 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 ANKRD49Q8WVL7 239 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 ZNF382Q96SR6 550 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 FAM86C2PA6NEL3 165 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 TSPAN6O43657 245 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 HNRNPA1P09651 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 IL7RP16871 459 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 PTX3P26022 381 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 OLR1P78380 273 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 NTHL1P78549 312 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 POMZP3Q6PJE2 187 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 RTL4Q6ZR62 310 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 SVOPLQ8N434 492 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 FANCEQ9HB96 536 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 C4AP0C0L4 1744 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 SCN9AQ15858 1988 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 A0A0J9YVX5 310 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 NME6O75414 186 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-208ENST00000478423 GADD45GO95257 159 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 MATN4O95460 622 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CTSAP10619 480 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CAPGP40121 348 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 PTPN5P54829 565 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 GPR153Q6NV75 609 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 NODALQ96S42 347 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CSNK1G1Q9HCP0 422 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 ABCB10Q9NRK6 738 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CALML5Q9NZT1 146 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 FZD4Q9ULV1 537 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 CEP290O15078 2479 aa13.85□□□□□ -0.19
NPHP4-208ENST00000478423 TMEM189-UBE2V1I3L0A0 370 aa13.84□□□□□ -0.19
NPHP4-208ENST00000478423 ADAMTS4O75173 837 aa13.84□□□□□ -0.19
NPHP4-208ENST00000478423 STATHP02808 62 aa13.84□□□□□ -0.19
NPHP4-208ENST00000478423 OPN1SWP03999 348 aa13.84□□□□□ -0.19
NPHP4-208ENST00000478423 CSNK2A2P19784 350 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms