RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ZNF696Q9H7X3 374 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 INTS7Q9NVH2 962 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 CRNNQ9UBG3 495 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 FZD4Q9ULV1 537 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 FADS2P1A8MWK0 482 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 UGT2B17O75795 530 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 RPS3P23396 243 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 PCBP2Q15366 365 aaKnown RBP eCLIP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 AHSA2Q719I0 299 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 C10orf53Q8N6V4 93 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 SRFBP1Q8NEF9 429 aaKnown RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 FBXL20Q96IG2 436 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 KCNH6Q9H252 994 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 ATP6V1HQ9UI12 483 aa14.26□□□□□ -0.13
HDAC6-220ENST00000477528 GREB1LQ9C091 1923 aaPredicted RBP14.26□□□□□ -0.13
HDAC6-220ENST00000477528 TEX28O15482 410 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 DYRK3O43781 588 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 ARSFP54793 590 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 SKP1P63208 163 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TYSND1Q2T9J0 566 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 SLC8B1Q6J4K2 584 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 LSMEM2Q8N112 164 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 AURKBQ96GD4 344 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TMEM45AQ9NWC5 275 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 NDUFS2O75306 463 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 RASAL1O95294 804 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 HPGDP15428 266 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 BPIP17213 487 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 WASP42768 502 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 BDKRB1P46663 353 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 ERVPABLB-1P60509 514 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 ATG9BQ674R7 924 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 P2RY8Q86VZ1 359 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 ARMC8Q8IUR7 673 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 CMTR2Q8IYT2 770 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 CELF5Q8N6W0 485 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 XAGE5Q8WWM1 108 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 RASSF5Q8WWW0 418 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 GATA6Q92908 595 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 MYOCQ99972 504 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 SGIP1Q9BQI5 828 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 RPF2Q9H7B2 306 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3DA0A087WVF3 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3IA0A087WXS9 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3EA0A087X179 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3KA0A087X1G2 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3FA6NER0 549 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3LB9A6J9 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3HP0C7X1 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 GPX3P22352 226 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 HSD17B2P37059 387 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 YAP1P46937 504 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 FOXA1P55317 472 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 MED22Q15528 200 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 SF1Q15637 639 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 PERM1Q5SV97 790 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3GQ6DHY5 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3CQ6IPX1 549 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 OGFOD2Q6N063 350 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 PIANPQ8IYJ0 282 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TBC1D3Q8IZP1 549 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 OTUB2Q96DC9 234 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 RDH12Q96NR8 316 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 RHBGQ9H310 441 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 TMEM181Q9P2C4 612 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 PCDHGB3Q9Y5G1 929 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 A0A1W2PRB8 838 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 DFNA5O60443 496 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 JAK1P23458 1154 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 KIAA1324Q6UXG2 1013 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 KBTBD2Q8IY47 623 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 VANGL1Q8TAA9 524 aaPredicted RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 ATOH8Q96SQ7 321 aa14.25□□□□□ -0.13
HDAC6-220ENST00000477528 REXO4Q9GZR2 422 aaKnown RBP14.25□□□□□ -0.13
HDAC6-220ENST00000477528 AP3D1O14617 1153 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 OR1F1O43749 312 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 NOS3P29474 1203 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ITGA1P56199 1179 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 LRP8Q14114 963 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 C9orf64Q5T6V5 341 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ZZZ3Q8IYH5 903 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 TCEAL8Q8IYN2 117 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF366Q8N895 744 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 SLC43A3Q8NBI5 491 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF483Q8TF39 744 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 ZNF296Q8WUU4 475 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 MRPL48Q96GC5 212 aaKnown RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 KLF16Q9BXK1 252 aaPredicted RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 FBXO10Q9UK96 956 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 GSTK1Q9Y2Q3 226 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 FOCADQ5VW36 1801 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PRSS51A0A1B0GVH4 220 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 PLK4O00444 970 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 CCNB2O95067 398 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 JUNP05412 331 aaKnown RBP14.24□□□□□ -0.13
HDAC6-220ENST00000477528 BCKDHAP12694 445 aa14.24□□□□□ -0.13
HDAC6-220ENST00000477528 IGFBP6P24592 240 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms