RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TMPRSS12Q86WS5 348 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 KLHDC8AQ8IYD2 350 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 DEPDC7Q96QD5 511 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 SMC6Q96SB8 1091 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 MAP3K3Q99759 626 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 TMEM79Q9BSE2 394 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 CPSF2Q9P2I0 782 aaKnown RBP21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 PTBP2Q9UKA9 531 aaKnown RBP21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 PCDHB11Q9Y5F2 797 aa21.4■■□□□ 1.02
MCF2L2-209ENST00000475664 GOLGA6L10A6NI86 522 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 TOX3O15405 576 aaPredicted RBP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 SASH3O75995 380 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 ANKRD34CP0C6C1 535 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 CCND1P24385 295 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 RPA3P35244 121 aaPredicted RBP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 GGT5P36269 586 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 SLC6A12P48065 614 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 TRA2AQ13595 282 aaKnown RBP eCLIP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 TSTA3Q13630 321 aaPredicted RBP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 C18orf21Q32NC0 220 aaPredicted RBP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 PTCHD3Q3KNS1 767 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 SNAP47Q5SQN1 464 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 PHF19Q5T6S3 580 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 ARHGAP22Q7Z5H3 698 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 TRIM73Q86UV7 250 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 CARFQ8N187 725 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 CHCHD4Q8N4Q1 142 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 ALKBH8Q96BT7 664 aaKnown RBP21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 PYCR2Q96C36 320 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 MED8Q96G25 268 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 C1GALT1Q9NS00 363 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 ZNF446Q9NWS9 450 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 WWOXQ9NZC7 414 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 TAC3Q9UHF0 121 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 GRID1Q9ULK0 1009 aa21.39■■□□□ 1.01
MCF2L2-209ENST00000475664 IGHV5-51A0A0C4DH38 117 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 A0A0J9YY10 115 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 IPO13O94829 963 aaKnown RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 FKBP9O95302 570 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 CDH3P22223 829 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 SF1Q15637 639 aaKnown RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 CACHD1Q5VU97 1274 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 PRAMEF13Q5VWM6 474 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 CAPN13Q6MZZ7 669 aaPredicted RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 TMPRSS7Q7RTY8 843 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 FAM20CQ8IXL6 584 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 GALNT15Q8N3T1 639 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 FBXO39Q8N4B4 442 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 OR2L3Q8NG85 312 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 UBTD2Q8WUN7 234 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 ACAT2Q9BWD1 397 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 PCBD2Q9H0N5 130 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 STMN4Q9H169 189 aaPredicted RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 ZNF768Q9H5H4 540 aaKnown RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 INTS7Q9NVH2 962 aaKnown RBP21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 TMCO1Q9UM00 188 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 ACTL7BQ9Y614 415 aa21.38■■□□□ 1.01
MCF2L2-209ENST00000475664 KIF26BQ2KJY2 2108 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 A8MU76 341 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 TMX2-CTNND1H3BSU7 103 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 TYROBPO43914 113 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 PLIN3O60664 434 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 SPAG7O75391 227 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 RASSF9O75901 435 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 PROCP04070 461 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 GFAPP14136 432 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 PVRP15151 417 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 ALDH18A1P54886 795 aaKnown RBP21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 SETDB1Q15047 1291 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 PFKFB4Q16877 469 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 ICE2Q659A1 982 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 LCTLQ6UWM7 567 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 DGLUCYQ7Z3D6 616 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 RCBTB1Q8NDN9 531 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 KLHL6Q8WZ60 621 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 GRAMD1AQ96CP6 724 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 TLCD1Q96CP7 247 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 OR4K3Q96R72 315 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 MIPEPQ99797 713 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 C12orf65Q9H3J6 166 aaKnown RBP21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 SSU72Q9NP77 194 aaKnown RBP21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 ABCF3Q9NUQ8 709 aa21.37■■□□□ 1.01
MCF2L2-209ENST00000475664 HEATR5BQ9P2D3 2071 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 SMIM24O75264 130 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 JUPP14923 745 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 ST6GAL1P15907 406 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 GDF5P43026 501 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 HSPA7P48741 367 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 AGTR2P50052 363 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 YBX1P67809 324 aaKnown RBP21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 PRDX1Q06830 199 aaKnown RBP21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 C16orf72Q14CZ0 275 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 CCDC153Q494R4 210 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 FBXO48Q5FWF7 155 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 THEMIS2Q5TEJ8 643 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 KIAA1614Q5VZ46 1190 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 THOC6Q86W42 341 aaKnown RBP21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 PTGR2Q8N8N7 351 aaPredicted RBP21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 ESAMQ96AP7 390 aa21.36■■□□□ 1.01
MCF2L2-209ENST00000475664 SLC41A2Q96JW4 573 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms