RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 AZIN2Q96A70 460 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 ANKZF1Q9H8Y5 726 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 MYNNQ9NPC7 610 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 ASIC3Q9UHC3 531 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 TMED3Q9Y3Q3 217 aa5.52□□□□□ -1.53
SMC5-203ENST00000475540 CACNA1FO60840 1977 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 A0A1W2PPQ1 181 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 E9PQ18 207 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 ZNF195O14628 629 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 DDHD2O94830 711 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 MOCS3O95396 460 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 TRIM49P0CI25 452 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 TRIM49CP0CI26 452 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 HAPLN1P10915 354 aaPredicted RBP5.51□□□□□ -1.53
SMC5-203ENST00000475540 PAX9P55771 341 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 TNIP1Q15025 636 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 PRR27Q6MZM9 219 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 ZNF613Q6PF04 617 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 TMEM207Q6UWW9 146 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 NUP54Q7Z3B4 507 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 ANKRD23Q86SG2 305 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 BMPERQ8N8U9 685 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 VANGL1Q8TAA9 524 aaPredicted RBP5.51□□□□□ -1.53
SMC5-203ENST00000475540 FAM20AQ96MK3 541 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 ATOH8Q96SQ7 321 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 KRT12Q99456 494 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 VGLL1Q99990 258 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 MTMR12Q9C0I1 747 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 SHARPINQ9H0F6 387 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 ANAPC2Q9UJX6 822 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 TRPV2Q9Y5S1 764 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 FAM169AQ9Y6X4 670 aa5.51□□□□□ -1.53
SMC5-203ENST00000475540 MPZP25189 248 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 RAD52P43351 418 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 CCR3P51677 355 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 HNRNPKP61978 463 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMC5-203ENST00000475540 GCNT1Q02742 428 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 KLC1Q07866 573 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 IL11RAQ14626 422 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 MCMDC2Q4G0Z9 681 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 LGI2Q8N0V4 545 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 TC2NQ8N9U0 490 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 POGLUT1Q8NBL1 392 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 ANKRD9Q96BM1 317 aaPredicted RBP5.5□□□□□ -1.53
SMC5-203ENST00000475540 C18orf12Q96KH6 178 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 USP28Q96RU2 1077 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 RBM4BQ9BQ04 359 aaKnown RBP5.5□□□□□ -1.53
SMC5-203ENST00000475540 CABLES2Q9BTV7 478 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 CDK19Q9BWU1 502 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 DGCR6LQ9BY27 220 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 PAK5Q9P286 719 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 C19orf25Q9UFG5 118 aaPredicted RBP5.5□□□□□ -1.53
SMC5-203ENST00000475540 CPSF3Q9UKF6 684 aaKnown RBP5.5□□□□□ -1.53
SMC5-203ENST00000475540 PPP1R3CQ9UQK1 317 aa5.5□□□□□ -1.53
SMC5-203ENST00000475540 MYH15Q9Y2K3 1946 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 DUS4LO95620 317 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 VDRP11473 427 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 DARSP14868 501 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 PCGF2P35227 344 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 LEPRP48357 1165 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 DRP2Q13474 957 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 SNTB1Q13884 538 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 PTPRCAPQ14761 206 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 E2F5Q15329 346 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 PHKG1Q16816 387 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 LETM2Q2VYF4 491 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 FASTKD1Q53R41 847 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 SLC25A47Q6Q0C1 308 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 PRPF39Q86UA1 669 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 C10orf90Q96M02 699 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 GPR88Q9GZN0 384 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 RSPH9Q9H1X1 276 aaPredicted RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 CNOT10Q9H9A5 744 aaKnown RBP5.49□□□□□ -1.53
SMC5-203ENST00000475540 CHST11Q9NPF2 352 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 PPP2R2CQ9Y2T4 447 aa5.49□□□□□ -1.53
SMC5-203ENST00000475540 COL2A1P02458 1487 aaPredicted RBP5.48□□□□□ -1.53
SMC5-203ENST00000475540 EDDM13A0A1B0GTR0 161 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 A0A1W2PRQ8 180 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 SYNDIG1LA6NDD5 238 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.48□□□□□ -1.53
SMC5-203ENST00000475540 ARPC2O15144 300 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 MAGEC1O60732 1142 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 CRLF1O75462 422 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 CLDN1O95832 211 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 IRF2P14316 349 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 SP100P23497 879 aaPredicted RBP5.48□□□□□ -1.53
SMC5-203ENST00000475540 ALDH3A2P51648 485 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 ALCAMQ13740 583 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 VEZF1Q14119 521 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 BECN1Q14457 450 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 LPAL2Q16609 132 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 ALDH1L2Q3SY69 923 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 LYSMD4Q5XG99 296 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 ENOSF1Q7L5Y1 443 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 LRRTM1Q86UE6 522 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 NDUFAF2Q8N183 169 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 OR4K1Q8NGD4 311 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 SMAP2Q8WU79 429 aaPredicted RBP5.48□□□□□ -1.53
SMC5-203ENST00000475540 ZNRF4Q8WWF5 429 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms