RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 NRP2O60462 931 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ZNF217O75362 1048 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ATP6V1G2O95670 118 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 CD6P30203 668 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 NEK2P51955 445 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 YPEL5P62699 121 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ZNF33BQ06732 778 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 RIPK1Q13546 671 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ARHGAP19Q14CB8 494 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 IL23RQ5VWK5 629 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SUSD1Q6UWL2 747 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 RD3Q7Z3Z2 195 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 FUNDC1Q8IVP5 155 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PGAM4Q8N0Y7 254 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 SETD7Q8WTS6 366 aaKnown RBP19.18■□□□□ 0.66
SSR1-204ENST00000474597 NEIL2Q969S2 332 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 IL17FQ96PD4 163 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ACPTQ9BZG2 426 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 IMP3Q9NV31 184 aaKnown RBP19.18■□□□□ 0.66
SSR1-204ENST00000474597 C1orf109Q9NX04 203 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 ZIM2Q9NZV7 527 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 WDR37Q9Y2I8 494 aa19.18■□□□□ 0.66
SSR1-204ENST00000474597 PCM1Q15154 2024 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 STK25O00506 426 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 TOR1BO14657 336 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 KCNK10P57789 538 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 ZP2Q05996 745 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 PCDH1Q08174 1060 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 GAS6Q14393 721 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 RFTN2Q52LD8 501 aaPredicted RBP19.17■□□□□ 0.66
SSR1-204ENST00000474597 WASHC2DQ5SRD0 308 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 CACHD1Q5VU97 1274 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 PCYOX1LQ8NBM8 494 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 OR1E3Q8WZA6 343 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 PDXPQ96GD0 296 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 INSM2Q96T92 566 aaPredicted RBP19.17■□□□□ 0.66
SSR1-204ENST00000474597 SERPINI1Q99574 410 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 GPR174Q9BXC1 333 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 WDR41Q9HAD4 459 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 C2orf42Q9NWW7 574 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 WSB2Q9NYS7 404 aaPredicted RBP19.17■□□□□ 0.66
SSR1-204ENST00000474597 SPATA7Q9P0W8 599 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 PCDHGA11Q9Y5H2 935 aa19.17■□□□□ 0.66
SSR1-204ENST00000474597 A0A088AWK7 358 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 MRASO14807 208 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 ANGPT2O15123 496 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 CFLARO15519 480 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 RSL1D1O76021 490 aaKnown RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 NPPBP16860 134 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 CD22P20273 847 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 PRAMEF14Q5SWL7 426 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 PRAMEF13Q5VWM6 474 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 DUS1LQ6P1R4 473 aaKnown RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 CYP20A1Q6UW02 462 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 ZFAND4Q86XD8 727 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 HAUS8Q9BT25 410 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 TPSD1Q9BZJ3 242 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 DENND2DQ9H6A0 471 aaPredicted RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 PRDM6Q9NQX0 595 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 PRPF19Q9UMS4 504 aaKnown RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 DMTF1Q9Y222 760 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 NDUFAF1Q9Y375 327 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 SERTM1A2A2V5 107 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 H0YIV9 168 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 FBP2O00757 339 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 TNFRSF10CO14798 259 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 G6PDP11413 515 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 CASP2P42575 452 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 RABIFP47224 123 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 UFM1P61960 85 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 CSTF3Q12996 717 aaKnown RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 FZD5Q13467 585 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 SNCBQ16143 134 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 UAP1L1Q3KQV9 507 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 PAGE2BQ5JRK9 111 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 BNC2Q6ZN30 1099 aaPredicted RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 Q6ZSR6 202 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 LRRC56Q8IYG6 542 aaPredicted RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 C2orf73Q8N5S3 287 aaPredicted RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 LMNTD1Q8N9Z9 388 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 TSPEARQ8WU66 669 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 SNX19Q92543 992 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 TSACCQ96A04 125 aaPredicted RBP19.16■□□□□ 0.66
SSR1-204ENST00000474597 SH3KBP1Q96B97 665 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 REPS1Q96D71 796 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 EBF2Q9HAK2 575 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 TMEM45AQ9NWC5 275 aa19.16■□□□□ 0.66
SSR1-204ENST00000474597 RASGRP1O95267 797 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 IGHV4-34P06331 123 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 C1GALT1C1LP0DN25 315 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 PCNAP12004 261 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 VARSP26640 1264 aaKnown RBP19.15■□□□□ 0.66
SSR1-204ENST00000474597 NUDT1P36639 197 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 POLR2JP52435 117 aaKnown RBP19.15■□□□□ 0.66
SSR1-204ENST00000474597 DDX39BQ13838 428 aaKnown RBP19.15■□□□□ 0.66
SSR1-204ENST00000474597 HIST2H2ACQ16777 129 aaPredicted RBP19.15■□□□□ 0.66
SSR1-204ENST00000474597 VPS26BQ4G0F5 336 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 HIST2H2AA3Q6FI13 130 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 MED27Q6P2C8 311 aa19.15■□□□□ 0.66
SSR1-204ENST00000474597 BLOC1S3Q6QNY0 202 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms