RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ELMOD1Q8N336 334 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 PCDH20Q8N6Y1 951 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 PI4KAP1Q8N8J0 262 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 ZNF610Q8N9Z0 462 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 IL17RCQ8NAC3 791 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 SNX19Q92543 992 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 TMEM143Q96AN5 459 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 MCUR1Q96AQ8 359 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 TMCO6Q96DC7 493 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 LRRC37BQ96QE4 947 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 PCYT2Q99447 389 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 CHP1Q99653 195 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 DDX47Q9H0S4 455 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 SEC31BQ9NQW1 1179 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 ZNF302Q9NR11 478 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 TREX1Q9NSU2 369 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 ZFP57Q9NU63 452 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 DNAJC17Q9NVM6 304 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 FAIMQ9NVQ4 179 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 STMN3Q9NZ72 180 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 SERGEFQ9UGK8 458 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 DNAI1Q9UI46 699 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 VPS4AQ9UN37 437 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 ADAMTS5Q9UNA0 930 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 MFHAS1Q9Y4C4 1052 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 PCDHAC2Q9Y5I4 1007 aa5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 EP300Q09472 2414 aaPredicted RBP5.93□□□□□ -1.46
SMARCE1-208ENST00000474246 RBAK-RBAKDNI3L0D1 243 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 HRKO00198 91 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 RFXAPO00287 272 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 HS3ST1O14792 307 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PRPF6O94906 941 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 OR2C1O95371 312 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ANXA2P07355 339 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 HBQ1P09105 142 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TYRP14679 529 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 NQO2P16083 231 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 HK1P19367 917 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ACP1P24666 158 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 UCP1P25874 307 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 OXTRP30559 389 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 KCNJ1P48048 391 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CLK3P49761 638 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 STAT2P52630 851 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 RAD23BP54727 409 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 YWHAGP61981 247 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TNNC1P63316 161 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TROAPQ12815 778 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CDH17Q12864 832 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TSPAN31Q12999 210 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TP53BP2Q13625 1128 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 DRAP1Q14919 205 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SHBQ15464 509 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TTC38Q5R3I4 469 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ZNF787Q6DD87 383 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 RGS7BPQ6MZT1 257 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PLEKHG7Q6ZR37 379 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 GPR141Q7Z602 305 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 RTN4RL2Q86UN3 420 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 VSTM4Q8IW00 320 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CCDC28AQ8IWP9 274 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SIRT2Q8IXJ6 389 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CDK20Q8IZL9 346 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CAMKVQ8NCB2 501 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PSD4Q8NDX1 1056 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 STKLD1Q8NE28 680 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 OR10T2Q8NGX3 314 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PIWIL2Q8TC59 973 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SLC2A14Q8TDB8 520 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 RASSF5Q8WWW0 418 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TRIB2Q92519 343 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 BOD1Q96IK1 185 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 MAGEB5Q9BZ81 275 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 MMP27Q9H306 513 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 GPN1Q9HCN4 374 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ASCL3Q9NQ33 180 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PCDHB16Q9NRJ7 776 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 HIF1ANQ9NWT6 349 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 LPAR3Q9UBY5 353 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SLCO3A1Q9UIG8 710 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 AMFRQ9UKV5 643 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PCDHA12Q9UN75 941 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 MTO1Q9Y2Z2 717 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CDH23Q9H251 3354 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SPTA1P02549 2419 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TRBV2A0A0J9YWF9 115 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 GNG14A0A1W2PPG7 69 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 OR5K3A6NET4 321 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ARHGAP42A6NI28 874 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 C4orf47A7E2U8 309 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 CLCA1A8K7I4 914 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 H7C0C1 242 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 LINC01387J3KSC0 135 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 KIAA0391O15091 583 aaKnown RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TOX3O15405 576 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 PSMD3O43242 534 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 TLX3O43711 291 aaPredicted RBP5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 SCN2BO60939 215 aa5.92□□□□□ -1.46
SMARCE1-208ENST00000474246 ATG13O75143 517 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms