RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NECTIN3Q9NQS3 549 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 DNMT3BQ9UBC3 853 aaKnown RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 TRPS1Q9UHF7 1281 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 TPRKBQ9Y3C4 175 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 WDR47O94967 919 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 FADS2O95864 444 aaKnown RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 EBLN1P0CF75 366 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 EPB42P16452 691 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 DGKAP23743 735 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 S100A3P33764 101 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 GBX1Q14549 363 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 PGS1Q32NB8 556 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 LRIF1Q5T3J3 769 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 CHST9Q7L1S5 443 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 ZBTB2Q8N680 514 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 ZNF641Q96N77 438 aaPredicted RBP20.56■□□□□ 0.88
COL18A1-207ENST00000473212 NTMT1Q9BV86 223 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 DUSP21Q9H596 190 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 GIN1Q9NXP7 522 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 ASIC5Q9NY37 505 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 GPRC5BQ9NZH0 403 aa20.56■□□□□ 0.88
COL18A1-207ENST00000473212 A0A096LPI6 279 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 PDYNP01213 254 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 MT-ND2P03891 347 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 IL1RNP18510 177 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 CST5P28325 142 aaPredicted RBP20.55■□□□□ 0.88
COL18A1-207ENST00000473212 HNF1BP35680 557 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 TMED10P49755 219 aaKnown RBP20.55■□□□□ 0.88
COL18A1-207ENST00000473212 CLCA4Q14CN2 919 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 LRRC73Q5JTD7 316 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 USP7Q93009 1102 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 CWH43Q9H720 699 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 BNIP3LO60238 219 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 MAGEA2P43356 314 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 FPGSQ05932 587 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 GPRC6AQ5T6X5 926 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 DOK6Q6PKX4 331 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 ANKS3Q6ZW76 656 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 PLD4Q96BZ4 506 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 ZNF300Q96RE9 604 aaPredicted RBP20.55■□□□□ 0.88
COL18A1-207ENST00000473212 BCL7BQ9BQE9 202 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 KLF16Q9BXK1 252 aaPredicted RBP20.55■□□□□ 0.88
COL18A1-207ENST00000473212 PPT2Q9UMR5 302 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 VPS4AQ9UN37 437 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 OR51B4Q9Y5P0 310 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 GMPPBQ9Y5P6 360 aa20.55■□□□□ 0.88
COL18A1-207ENST00000473212 ZBBXA8MT70 800 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 JUNDP17535 347 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 RBFAQ8N0V3 343 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 ZNF540Q8NDQ6 660 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 OR6Q1Q8NGQ2 317 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 DYNC2LI1Q8TCX1 351 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 CEP295NLQ96MC4 621 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 FBXO8Q9NRD0 319 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 SCN3BQ9NY72 215 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 HECAQ9UBI9 543 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-207ENST00000473212 CRLS1Q9UJA2 301 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 THSD7BQ9C0I4 1608 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 hCG_2039718K7EN88 272 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 EFNA1P20827 205 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-207ENST00000473212 TGM1P22735 817 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 ACRV1P26436 265 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 EPHA2P29317 976 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 PTPN6P29350 595 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 TGFBR1P36897 503 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 SERPINB10P48595 397 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 SMAD3P84022 425 aaKnown RBP20.54■□□□□ 0.88
COL18A1-207ENST00000473212 SYT6Q5T7P8 510 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-207ENST00000473212 OR2T5Q6IEZ7 315 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 CAPN13Q6MZZ7 669 aaPredicted RBP20.54■□□□□ 0.88
COL18A1-207ENST00000473212 OR2T29Q8NH02 315 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 HEPHQ9BQS7 1158 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 HERC2P3Q9BVR0 1158 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 SACM1LQ9NTJ5 587 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 MAN2B2Q9Y2E5 1009 aa20.54■□□□□ 0.88
COL18A1-207ENST00000473212 ANAPC1Q9H1A4 1944 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 WNT9AO14904 365 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 AQP9O43315 295 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 CNOT3O75175 753 aaKnown RBP20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RPS3P23396 243 aaKnown RBP eCLIP20.53■□□□□ 0.885e-25■■□□□ 12.7
COL18A1-207ENST00000473212 CLDN8P56748 225 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 ABHD18Q0P651 414 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RNF165Q6ZSG1 346 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RNF180Q86T96 592 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RPL3LQ92901 407 aaKnown RBP20.53■□□□□ 0.88
COL18A1-207ENST00000473212 ALG14Q96F25 216 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RETREG1Q9H6L5 497 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 RMND5AQ9H871 391 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 TRPM5Q9NZQ8 1165 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 STK16O75716 305 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 SLC10A3P09131 477 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 SF1Q15637 639 aaKnown RBP20.53■□□□□ 0.88
COL18A1-207ENST00000473212 MAPK11Q15759 364 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 INAVAQ3KP66 663 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 KDM4DQ6B0I6 523 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 SNX20Q7Z614 316 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 GPR26Q8NDV2 337 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 UBE2FQ969M7 185 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 BTBD2Q9BX70 525 aa20.53■□□□□ 0.88
COL18A1-207ENST00000473212 ASPSCR1Q9BZE9 553 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms