RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 CDSNQ15517 529 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CCDC152Q4G0S7 254 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MIIPQ5JXC2 388 aa2.55□□□□□ -2
XRN1-210ENST00000472697 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
XRN1-210ENST00000472697 LIPKQ5VXJ0 399 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RAET1GQ6H3X3 334 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CENPPQ6IPU0 288 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RGMBQ6NW40 437 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CYB5R4Q7L1T6 521 aa2.55□□□□□ -2
XRN1-210ENST00000472697 DET1Q7L5Y6 550 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TECPR1Q7Z6L1 1165 aa2.55□□□□□ -2
XRN1-210ENST00000472697 LAX1Q8IWV1 398 aa2.55□□□□□ -2
XRN1-210ENST00000472697 C1orf87Q8N0U7 546 aa2.55□□□□□ -2
XRN1-210ENST00000472697 BATF2Q8N1L9 274 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CRYBG2Q8N1P7 616 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PCDH20Q8N6Y1 951 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 MIGA1Q8NAN2 632 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SMRP1Q8NCR6 262 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ADPRHL1Q8NDY3 354 aa2.55□□□□□ -2
XRN1-210ENST00000472697 OR11H4Q8NGC9 324 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CKAP2Q8WWK9 683 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RFT1Q96AA3 541 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RNF183Q96D59 192 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MRPL53Q96EL3 112 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 NUDCD1Q96RS6 583 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ALG8Q9BVK2 526 aa2.55□□□□□ -2
XRN1-210ENST00000472697 KCNK13Q9HB14 408 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MRPL17Q9NRX2 175 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 CENPMQ9NSP4 180 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RBM28Q9NW13 759 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 DDX25Q9UHL0 483 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 KLF2Q9Y5W3 355 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 SYNRGQ9UMZ2 1314 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ANKRD30BQ9BXX2 1392 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ADAMTS7Q9UKP4 1686 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ARFGEF1Q9Y6D6 1849 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ARID1BQ8NFD5 2236 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 NRXN1Q9ULB1 1477 aa2.55□□□□□ -2
XRN1-210ENST00000472697 NSD2O96028 1365 aa2.55□□□□□ -2
XRN1-210ENST00000472697 WDR19Q8NEZ3 1342 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 A0A1W2PPQ1 181 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SRRM4A7MD48 611 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 MCF2LO15068 1137 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CHADO15335 359 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PEX1O43933 1283 aa2.55□□□□□ -2
XRN1-210ENST00000472697 NDUFS7O75251 213 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PROS1P07225 676 aa2.55□□□□□ -2
XRN1-210ENST00000472697 IQCF3P0C7M6 154 aa2.55□□□□□ -2
XRN1-210ENST00000472697 DANCRP0C864 163 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CBLP22681 906 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TUBG1P23258 451 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ME1P48163 572 aa2.55□□□□□ -2
XRN1-210ENST00000472697 KHKP50053 298 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CLDN20P56880 219 aa2.55□□□□□ -2
XRN1-210ENST00000472697 BTG1P62324 171 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MAPK11Q15759 364 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CCDC57Q2TAC2 916 aa2.55□□□□□ -2
XRN1-210ENST00000472697 HERC4Q5GLZ8 1057 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 EPHA10Q5JZY3 1008 aa2.55□□□□□ -2
XRN1-210ENST00000472697 FAM46CQ5VWP2 391 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PM20D1Q6GTS8 502 aa2.55□□□□□ -2
XRN1-210ENST00000472697 FAM166AQ6J272 317 aa2.55□□□□□ -2
XRN1-210ENST00000472697 LCN10Q6JVE6 187 aa2.55□□□□□ -2
XRN1-210ENST00000472697 AAGABQ6PD74 315 aa2.55□□□□□ -2
XRN1-210ENST00000472697 FAM198BQ6UWH4 519 aa2.55□□□□□ -2
XRN1-210ENST00000472697 PLEKHM3Q6ZWE6 761 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CDR2LQ86X02 465 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 SLC22A9Q8IVM8 553 aa2.55□□□□□ -2
XRN1-210ENST00000472697 MINDY2Q8NBR6 621 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CCDC110Q8TBZ0 833 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SEMA4DQ92854 862 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ALG14Q96F25 216 aa2.55□□□□□ -2
XRN1-210ENST00000472697 IGSF21Q96ID5 467 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SFXN2Q96NB2 322 aa2.55□□□□□ -2
XRN1-210ENST00000472697 TEFMQ96QE5 360 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 TRMT61BQ9BVS5 477 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 TUBG2Q9NRH3 451 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ASB6Q9NWX5 421 aa2.55□□□□□ -2
XRN1-210ENST00000472697 BTBD3Q9Y2F9 522 aa2.55□□□□□ -2
XRN1-210ENST00000472697 RNF114Q9Y508 228 aa2.55□□□□□ -2
XRN1-210ENST00000472697 KLK4Q9Y5K2 254 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CACNA1IQ9P0X4 2223 aa2.55□□□□□ -2
XRN1-210ENST00000472697 LRRC37A3O60309 1634 aa2.55□□□□□ -2
XRN1-210ENST00000472697 OVOS2A0A0G2JMS6 1433 aa2.55□□□□□ -2
XRN1-210ENST00000472697 OVOS2A0A0J9YW53 1432 aa2.55□□□□□ -2
XRN1-210ENST00000472697 OVOS2Q6IE36 1432 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ADAM10O14672 748 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ZIC3O60481 467 aa2.55□□□□□ -2
XRN1-210ENST00000472697 HLA-DQA2P01906 255 aa2.55□□□□□ -2
XRN1-210ENST00000472697 CSN3P07498 182 aa2.55□□□□□ -2
XRN1-210ENST00000472697 STAG3L1P0CL83 205 aa2.55□□□□□ -2
XRN1-210ENST00000472697 BDKRB2P30411 391 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ARRB2P32121 409 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SOX6P35712 828 aa2.55□□□□□ -2
XRN1-210ENST00000472697 DLSTP36957 453 aa2.55□□□□□ -2
XRN1-210ENST00000472697 ARL1P40616 181 aaPredicted RBP2.55□□□□□ -2
XRN1-210ENST00000472697 MTTPP55157 894 aa2.55□□□□□ -2
XRN1-210ENST00000472697 SNU13P55769 128 aaKnown RBP2.55□□□□□ -2
XRN1-210ENST00000472697 P2RX3P56373 397 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms