RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ZNF598Q86UK7 904 aaKnown RBP8.38□□□□□ -1.07
CD47-204ENST00000471694 LRRN4CLQ8ND94 238 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 MBOAT7Q96N66 472 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 HERPUD2Q9BSE4 406 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 CST11Q9H112 138 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 XKR8Q9H6D3 395 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 GIN1Q9NXP7 522 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 PPLO60437 1756 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 SLIT3O75094 1523 aa8.38□□□□□ -1.07
CD47-204ENST00000471694 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 ZNF860A6NHJ4 632 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SOX1O00570 391 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 KDELR3O43731 214 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 AGR2O95994 175 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DCNP07585 359 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 CD46P15529 392 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GKP32189 559 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DLX2Q07687 328 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 ST3GAL4Q11206 333 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SOWAHAQ2M3V2 549 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ZNF311Q5JNZ3 666 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TMEM31Q5JXX7 168 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 FBXL22Q6P050 247 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 NXPE1Q8N323 547 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CLSTN3Q9BQT9 956 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ULBP3Q9BZM4 244 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DHRS7Q9Y394 339 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TIMM22Q9Y584 194 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 HS3ST4Q9Y661 456 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 FTCDNL1E5RQL4 147 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PPP1R11O60927 126 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 CYP4B1P13584 511 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 RPS9P46781 194 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 TNK2Q07912 1038 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SGCAQ16586 387 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 IQCCQ4KMZ1 466 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 BEND4Q6ZU67 534 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 C8orf59Q8N0T1 100 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 GPR137CQ8N3F9 429 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ZADH2Q8N4Q0 377 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DCBLD1Q8N8Z6 715 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 ECHDC3Q96DC8 303 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ZNF599Q96NL3 588 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 FN3KQ9H479 309 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 COQ3Q9NZJ6 369 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PNMA8CA0A1B0GUJ8 204 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CCDC162PA2VCL2 907 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PRAMEF26H0Y7S4 382 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 HNRNPA2B1P22626 353 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 ACVRL1P37023 503 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ALDH3A2P51648 485 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 DEFB103AP81534 67 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 MALLQ13021 153 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GPR33Q49SQ1 333 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PYDC2Q56P42 97 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 C3orf38Q5JPI3 329 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TMEM201Q5SNT2 666 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TNFAIP8L2Q6P589 184 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 C17orf99Q6UX52 265 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SLC26A9Q7LBE3 791 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 C12orf56Q8IXR9 622 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 BPIFB6Q8NFQ5 453 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 HM13Q8TCT9 377 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 RLN3Q8WXF3 142 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 TUBGCP5Q96RT8 1024 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 IL1RAPQ9NPH3 570 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 C3orf18Q9UK00 162 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 MYOCOSA0A1B0GUC4 107 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 PGRMC2O15173 223 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ITGA5P08648 1049 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ZNF35P13682 527 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ARSAP15289 507 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 RPS6KA3P51812 740 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 NEDD8Q15843 81 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SPESP1Q6UW49 350 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 BHLHE22Q8NFJ8 381 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 TMEM234Q8WY98 164 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 OXNAD1Q96HP4 312 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 ARL5BQ96KC2 179 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CDH20Q9HBT6 801 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 AFDNP55196 1824 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 GPR89AB7ZAQ6 455 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ANXA2P07355 339 aaKnown RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 CD63P08962 238 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 GPR89BP0CG08 455 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ALOX12P18054 663 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CPOXP36551 454 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ECM1Q16610 540 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 Q6ZSR6 202 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 C6orf120Q7Z4R8 191 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SLC5A8Q8N695 610 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 OR6Y1Q8NGX8 325 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 OR8K5Q8NH50 307 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 SPRYD4Q8WW59 207 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 DNAJC9Q8WXX5 260 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 CPNE2Q96FN4 548 aaPredicted RBP8.37□□□□□ -1.07
CD47-204ENST00000471694 IL25Q9H293 177 aa8.37□□□□□ -1.07
CD47-204ENST00000471694 ANKZF1Q9H8Y5 726 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms