RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 CLCA3PQ9Y6N3 262 aa6.25□□□□□ -1.41
SMC5-202ENST00000471372 IGLV5-52A0A0A0MRZ9 124 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 GAPDHSO14556 408 aaPredicted RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 ZNHIT1O43257 154 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 RAD51DO75771 328 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 CXCL14O95715 111 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 TFAP2AP05549 437 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 CKMT2P17540 419 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 GM2AP17900 193 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 HOXD3P31249 432 aaPredicted RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 HOXA11P31270 313 aaPredicted RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 NKX2-1P43699 371 aaPredicted RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 CX3CL1P78423 397 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 AKAP17AQ02040 695 aaKnown RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 ARHGAP1Q07960 439 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 SLC20A2Q08357 652 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 RASGEF1BQ0VAM2 473 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 Q0VFX4 171 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 PDE7AQ13946 482 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 UGP2Q16851 508 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 TDRD12Q587J7 1177 aaKnown RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 OR7E24Q6IFN5 339 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 COLCA1Q6ZS62 124 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 ANKRD33Q7Z3H0 272 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 FJX1Q86VR8 437 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 MMD2Q8IY49 270 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 OR11H4Q8NGC9 324 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 CCDC107Q8WV48 283 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 CKAP2Q8WWK9 683 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 IRGQQ8WZA9 623 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 PIGBQ92521 554 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 PKP2Q99959 881 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 DCLK3Q9C098 648 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 SPRTNQ9H040 489 aaPredicted RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 RBM38Q9H0Z9 239 aaKnown RBP6.24□□□□□ -1.41
SMC5-202ENST00000471372 CUEDC2Q9H467 287 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 DAPK2Q9UIK4 370 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 EXOC6BQ9Y2D4 811 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 COX11Q9Y6N1 276 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 ATP8B3O60423 1300 aa6.24□□□□□ -1.41
SMC5-202ENST00000471372 LY6G6EA0A0G2JKS1 128 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 PRR32B1ATL7 298 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 TLR4O00206 839 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 PLOD2O00469 737 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 MOCS2O96007 188 aaPredicted RBP6.23□□□□□ -1.41
SMC5-202ENST00000471372 SERPING1P05155 500 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 LINC00271P0C7V0 271 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
SMC5-202ENST00000471372 SFNP31947 248 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 ACVRL1P37023 503 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 MNDAP41218 407 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 MMP13P45452 471 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 RPL21P46778 160 aaKnown RBP6.23□□□□□ -1.41
SMC5-202ENST00000471372 GALK2Q01415 458 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 GCNT1Q02742 428 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 EFHC1Q5JVL4 640 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 SPDYCQ5MJ68 293 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 GFRALQ6UXV0 394 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 ASB18Q6ZVZ8 466 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 ASPGQ86U10 573 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 TMEM219Q86XT9 240 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 TMEM139Q8IV31 216 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 ELMOD2Q8IZ81 293 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 PPFIBP2Q8ND30 876 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 CCNYQ8ND76 341 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 OR4K1Q8NGD4 311 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 EXOC6Q8TAG9 804 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 TMEM19Q96HH6 336 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 FAM20AQ96MK3 541 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 OR1F2PQ96R84 312 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 CDK19Q9BWU1 502 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 CSTL1Q9H114 145 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 SIX4Q9UIU6 781 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 NOCTQ9UK39 431 aaKnown RBP6.23□□□□□ -1.41
SMC5-202ENST00000471372 KLK4Q9Y5K2 254 aa6.23□□□□□ -1.41
SMC5-202ENST00000471372 C2orf92A0A1B0GVN3 265 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 E9PI62 339 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 F8VVB4 439 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 F8VWA3 439 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 NDC80O14777 642 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 KCNJ13O60928 360 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 PTBP3O95758 552 aaKnown RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 TGFAP01135 160 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 CCDC192P0DO97 292 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 GNL1P36915 607 aaPredicted RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 ARCN1P48444 511 aaKnown RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 SRSF4Q08170 494 aaKnown RBP6.22□□□□□ -1.41
SMC5-202ENST00000471372 DSC1Q08554 894 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 GTF2H2Q13888 395 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 RABEP1Q15276 862 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 CALCRLQ16602 461 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 MTX3Q5HYI7 312 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 C12orf60Q5U649 245 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 GTF2H2CQ6P1K8 395 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 FAM122CQ6P4D5 195 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 RHBDF2Q6PJF5 856 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 PLEKHM3Q6ZWE6 761 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 ARMC9Q7Z3E5 817 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 WBP2Q969T9 261 aa6.22□□□□□ -1.41
SMC5-202ENST00000471372 RASL10BQ96S79 203 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms