RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TRIM60Q495X7 471 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 SGO1Q5FBB7 561 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 ARMCX4Q5H9R4 360 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 RAB41Q5JT25 222 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 EEF1AKMT1Q8WVE0 214 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 HMCESQ96FZ2 354 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 KCNC2Q96PR1 638 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 TTPALQ9BTX7 342 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 ZNF717Q9BY31 904 aaPredicted RBP13.41□□□□□ -0.26
NPHP4-207ENST00000470763 DPY30Q9C005 99 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 GPR83Q9NYM4 423 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 MUTYHQ9UIF7 546 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 FAM25AB3EWG3 89 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 FAM25CB3EWG5 89 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 FAM25GB3EWG6 89 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 HHLA1C9JL84 531 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 NIPSNAP2O75323 286 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 PTHP01270 115 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 YES1P07947 543 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 STSP08842 583 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 VLDLRP98155 873 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 ELP6Q0PNE2 266 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 NPRL3Q12980 569 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 MADCAM1Q13477 382 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 GPSM1Q86YR5 675 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 UBE2J2Q8N2K1 259 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 LIX1Q8N485 282 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 TOP6BLQ8N6T0 577 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 SCAMP5Q8TAC9 235 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 GDF15Q99988 308 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 FARSBQ9NSD9 589 aaKnown RBP13.41□□□□□ -0.26
NPHP4-207ENST00000470763 ERVW-1Q9UQF0 538 aa13.41□□□□□ -0.26
NPHP4-207ENST00000470763 UBL4AP11441 157 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TNFSF8P32971 234 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PGFP49763 221 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TTLL4Q14679 1199 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 CCDC28AQ8IWP9 274 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TRIM48Q8IWZ4 208 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ARRDC4Q8NCT1 418 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 UBASH3BQ8TF42 649 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 FCGR1BQ92637 280 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PSMG2Q969U7 264 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ZFP42Q96MM3 310 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ZNF382Q96SR6 550 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 POPDC3Q9HBV1 291 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 STMN3Q9NZ72 180 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 COMMD10Q9Y6G5 202 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 E9PAM4 449 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 M0R129 80 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 FGF10O15520 208 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 SNX4O95219 450 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 SOX6P35712 828 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 RENBPP51606 427 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 SLC14A1Q13336 389 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 CAMK2GQ13555 558 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TBCEQ15813 527 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 BAK1Q16611 211 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PTPRNQ16849 979 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PARP15Q460N3 678 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 VN1R5Q7Z5H4 357 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GLB1L3Q8NCI6 653 aaPredicted RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 SNAPC3Q92966 411 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TMCO6Q96DC7 493 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 LINGO1Q96FE5 620 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 SATB2Q9UPW6 733 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GRIP1Q9Y3R0 1128 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GBF1Q92538 1859 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 A0A1W2PQ72 361 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TEX28O15482 410 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ADORA3P0DMS8 318 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 OR3A3P47888 321 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ARHGAP1Q07960 439 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GRIK4Q16099 956 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 DUSP7Q16829 419 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 RTL3Q8N8U3 475 aaKnown RBP13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GGHQ92820 318 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 GABARAPL1Q9H0R8 117 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 TIGARQ9NQ88 270 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 RAD18Q9NS91 495 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 PCDHGA6Q9Y5G7 932 aa13.4□□□□□ -0.26
NPHP4-207ENST00000470763 ANKRD36A6QL64 1941 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 HMX3A6NHT5 357 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 CCDC85CA6NKD9 419 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 PDHXO00330 501 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 IRAK2O43187 625 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 OR1I1O60431 355 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 FKTNO75072 461 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 KRT6AP02538 564 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 KRT6BP04259 564 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 IL7P13232 177 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 DNAJA1P31689 397 aaKnown RBP13.39□□□□□ -0.27
NPHP4-207ENST00000470763 HNF4AP41235 474 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 PIK3CBP42338 1070 aa13.39□□□□□ -0.27
NPHP4-207ENST00000470763 RGS6P49758 472 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms