RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 OTUD6BQ8N6M0 293 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 PRR7Q8TB68 274 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 MAGEC3Q8TD91 643 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 MAIP1Q8WWC4 291 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 C19orf60Q96EN9 201 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 VPS50Q96JG6 964 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 SPSB2Q99619 263 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 ASF1BQ9NVP2 202 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 FBXL4Q9UKA2 621 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 NFS1Q9Y697 457 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 FAM169AQ9Y6X4 670 aa16.75■□□□□ 0.27
COL7A1-208ENST00000470076 MDC1Q14676 2089 aaKnown RBP16.74■□□□□ 0.27
COL7A1-208ENST00000470076 MASP2O00187 686 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 PFDN6O15212 129 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 CTSVO60911 334 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 ITGA3P26006 1051 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 EIF3BP55884 814 aaKnown RBP16.74■□□□□ 0.27
COL7A1-208ENST00000470076 CDK16Q00536 496 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 RNF187Q5TA31 235 aaPredicted RBP16.74■□□□□ 0.27
COL7A1-208ENST00000470076 PRAMEF13Q5VWM6 474 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 MRNIPQ6NTE8 343 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 Q6ZS92 163 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 COX15Q7KZN9 410 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 OR2L3Q8NG85 312 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 KIFC1Q9BW19 673 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 SLC6A20Q9NP91 592 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 HS3ST3B1Q9Y662 390 aa16.74■□□□□ 0.27
COL7A1-208ENST00000470076 H3BMM5 538 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 SOCS6O14544 535 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 VAPBO95292 243 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 CBX6O95503 412 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 ARNTP27540 789 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 ATP5DP30049 168 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 BDKRB1P46663 353 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 VSX2P58304 361 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-208ENST00000470076 NAA25Q14CX7 972 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 NR6A1Q15406 480 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 TYSND1Q2T9J0 566 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 CCSMST1Q4G0I0 132 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 CTSL3PQ5NE16 218 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 WASHC2DQ5SRD0 308 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 IRAK1BP1Q5VVH5 260 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 CNSTQ6PJW8 725 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 OR2A1Q8NGT9 310 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-208ENST00000470076 INPP5DQ92835 1189 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 BIRC8Q96P09 236 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 TCF12Q99081 682 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 MIPEPQ99797 713 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 ZBTB20Q9HC78 741 aaPredicted RBP16.73■□□□□ 0.27
COL7A1-208ENST00000470076 SEMA3GQ9NS98 782 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 CTSFQ9UBX1 484 aa16.73■□□□□ 0.27
COL7A1-208ENST00000470076 RUVBL2Q9Y230 463 aaKnown RBP16.73■□□□□ 0.27
COL7A1-208ENST00000470076 COPG1Q9Y678 874 aaKnown RBP16.73■□□□□ 0.27
COL7A1-208ENST00000470076 POLEQ07864 2286 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 HYKKA2RU49 373 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 VSTM2BA6NLU5 285 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 MATN4O95460 622 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 FGGP02679 453 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 ESR1P03372 595 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 TPSB2P20231 275 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 MGAT1P26572 445 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 PSMB5P28074 263 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 OR1D4P47884 311 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 ADARP55265 1226 aaKnown RBP16.72■□□□□ 0.27
COL7A1-208ENST00000470076 GBX1Q14549 363 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 TPSAB1Q15661 275 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 RBBP7Q16576 425 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 TUBB8Q3ZCM7 444 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 AGAP7PQ5VUJ5 663 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 ARMC3Q5W041 872 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 LRRC8BQ6P9F7 803 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 KIRREL2Q6UWL6 708 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 PPP4R1Q8TF05 950 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 COG1Q8WTW3 980 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 LPGAT1Q92604 370 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 MFSD3Q96ES6 412 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 AGAP4Q96P64 663 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 BARD1Q99728 777 aaKnown RBP16.72■□□□□ 0.27
COL7A1-208ENST00000470076 WDR77Q9BQA1 342 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-208ENST00000470076 SOX17Q9H6I2 414 aaPredicted RBP16.72■□□□□ 0.27
COL7A1-208ENST00000470076 HOMER3Q9NSC5 361 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 SYBUQ9NX95 663 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 SOX13Q9UN79 622 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 PCDHGA10Q9Y5H3 936 aa16.72■□□□□ 0.27
COL7A1-208ENST00000470076 A0A0J9YVX5 310 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 A0A1W2PPV9 198 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 NIPSNAP2O75323 286 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 RNF224P0DH78 156 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 CMPK1P30085 196 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 FMO4P31512 558 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 GLRBP48167 497 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 CARSP49589 748 aaKnown RBP16.71■□□□□ 0.27
COL7A1-208ENST00000470076 ELOAQ14241 798 aaKnown RBP16.71■□□□□ 0.27
COL7A1-208ENST00000470076 FRMPD2BQ6IN97 320 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 PRMT9Q6P2P2 845 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 IGFL2Q6UWQ7 119 aa16.71■□□□□ 0.27
COL7A1-208ENST00000470076 CES3Q6UWW8 571 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms