RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CCINQ13939 588 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 NFYCQ13952 458 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 E2F2Q14209 437 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 LRRC32Q14392 662 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 HIST2H2ACQ16777 129 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ZNF423Q2M1K9 1284 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 DPY19L1Q2PZI1 675 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PRAMEF14Q5SWL7 426 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PRAMEF13Q5VWM6 474 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 METRNLQ641Q3 311 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 HIST2H2AA3Q6FI13 130 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 C8orf82Q6P1X6 216 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ZFP1Q6P2D0 407 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 LCTLQ6UWM7 567 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 MINDY1Q8N5J2 469 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PPFIBP2Q8ND30 876 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 OR2T34Q8NGX1 318 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 OR5K2Q8NHB8 316 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 DNAJB8Q8NHS0 232 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SETD7Q8WTS6 366 aaKnown RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 TFGQ92734 400 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 WDR34Q96EX3 536 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 UHRF1Q96T88 793 aaPredicted RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 HBEGFQ99075 208 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 APOOQ9BUR5 198 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SGPP1Q9BX95 441 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ACPTQ9BZG2 426 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 DPY30Q9C005 99 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ZDHHC5Q9C0B5 715 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PCBD2Q9H0N5 130 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 VCX3BQ9H321 246 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 CD248Q9HCU0 757 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 MBNL1Q9NR56 388 aaKnown RBP9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ABCD2Q9UBJ2 740 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 LIMD1Q9UGP4 676 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 ZNHIT2Q9UHR6 403 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 SLC17A4Q9Y2C5 497 aa9.06□□□□□ -0.96
SMC1A-205ENST00000469129 PRMT3O60678 531 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 PAK4O96013 591 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 IL6P05231 212 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 ERGP11308 486 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 G6PDP11413 515 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 ACP5P13686 325 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 NDUFV2P19404 249 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 IDSP22304 550 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 HNRNPA2B1P22626 353 aaKnown RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 HTR1BP28222 390 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SERPINB1P30740 379 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 AKT2P31751 481 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 GCKP35557 465 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 NUDT1P36639 197 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 VHLP40337 213 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 UFM1P61960 85 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 CTBSQ01459 385 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 HMGCS1Q01581 520 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 TDGQ13569 410 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 CEACAM7Q14002 265 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 DOC2AQ14183 400 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 FGL2Q14314 439 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 MLF2Q15773 248 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SMAD2Q15796 467 aaKnown RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 CYP2A13Q16696 494 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 ZXDCQ2QGD7 858 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 LEXMQ3ZCV2 418 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 VPS26BQ4G0F5 336 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 CCSMST1Q4G0I0 132 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 TIGD2Q4W5G0 525 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 RFTN2Q52LD8 501 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SPIN4Q56A73 249 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SGO1Q5FBB7 561 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 THEMIS2Q5TEJ8 643 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 FAM219BQ5XKK7 198 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 ATG9BQ674R7 924 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 MED27Q6P2C8 311 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 XKR5Q6UX68 686 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 FAM83HQ6ZRV2 1179 aaPredicted RBP9.05□□□□□ -0.96
SMC1A-205ENST00000469129 MSANTD1Q6ZTZ1 278 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 DHDDSQ86SQ9 333 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 TMPRSS11BQ86T26 416 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 TBC1D21Q8IYX1 336 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SYNPOQ8N3V7 929 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 LIX1Q8N485 282 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 DPP10Q8N608 796 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 PROKR1Q8TCW9 393 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SLC26A7Q8TE54 656 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 SLC5A11Q8WWX8 675 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 LRRC58Q96CX6 371 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 FCRL1Q96LA6 429 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 MRGPRX1Q96LB2 322 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 LGR4Q9BXB1 951 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 OSBPL6Q9BZF3 934 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 BTBD1Q9H0C5 482 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 EBF2Q9HAK2 575 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 PELI2Q9HAT8 420 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 S100A14Q9HCY8 104 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
SMC1A-205ENST00000469129 FARSBQ9NSD9 589 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms