RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 ACAT2Q9BWD1 397 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 B3GNT4Q9C0J1 378 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 CHRNA10Q9GZZ6 450 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 KLHL25Q9H0H3 589 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 VPS11Q9H270 941 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 PDE7BQ9NP56 450 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 ASCL3Q9NQ33 180 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 FBXO8Q9NRD0 319 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 SOHLH2Q9NX45 425 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 SLC39A1Q9NY26 324 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 PTPRBP23467 1997 aa11.52□□□□□ -0.57
VPS13D-204ENST00000469054 CCDC189A1A4V9 331 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 CDRT15L2A8MXV6 281 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 C1QTNF9BB2RNN3 333 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 POLR1CO15160 346 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PRAMEF10O60809 474 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 KLHL2O95198 593 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 C1QTNF9P0C862 333 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TFEBP19484 476 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 MAGP20916 626 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PSMB5P28074 263 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 CMPK1P30085 196 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 RPA3P35244 121 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 RAB15P59190 212 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ERVPABLB-1P60509 514 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 FOXM1Q08050 763 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 NAE1Q13564 534 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 KCNAB1Q14722 419 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ACAP2Q15057 778 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 RASA2Q15283 850 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 OR4D1Q15615 310 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ZIC1Q15915 447 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ZXDCQ2QGD7 858 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 DCAF12Q5T6F0 453 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TMEM164Q5U3C3 297 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 KIAA1614Q5VZ46 1190 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 UNQ6494/PRO21346Q6UXR6 183 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 GPSM1Q86YR5 675 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PLD6Q8N2A8 252 aaKnown RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 C19orf47Q8N9M1 422 aaKnown RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 OR2L3Q8NG85 312 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 OR56A3Q8NH54 315 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 OR2W6PQ8NHA6 318 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ZUFSPQ96AP4 578 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TCTN2Q96GX1 697 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 CABS1Q96KC9 395 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ZNF578Q96N58 590 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 MIPEPQ99797 713 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 EGFL8Q99944 293 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PCBD2Q9H0N5 130 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ATG10Q9H0Y0 220 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 CCDC86Q9H6F5 360 aaKnown RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 ALG9Q9H6U8 611 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 APMAPQ9HDC9 416 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 CCDC177Q9NQR7 707 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 THSD1Q9NS62 852 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 INTS7Q9NVH2 962 aaKnown RBP11.51□□□□□ -0.57
VPS13D-204ENST00000469054 DKK4Q9UBT3 224 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TAC3Q9UHF0 121 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PCDHGA7Q9Y5G6 932 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 PCDHGA3Q9Y5H0 932 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 KLK4Q9Y5K2 254 aa11.51□□□□□ -0.57
VPS13D-204ENST00000469054 TARM1B6A8C7 271 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 C9orf172C9J069 976 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 NVLO15381 856 aaKnown RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 KERAO60938 352 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CDH16O75309 829 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 RFPL1O75677 317 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CCNDBP1O95273 360 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CAPNS1P04632 268 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 EBLN1P0CF75 366 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 COL6A2P12110 1019 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CCND1P24385 295 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 GRIA3P42263 894 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 KCNC1P48547 511 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 HNMTP50135 292 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 TBPL1P62380 186 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ABATP80404 500 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 PRDX1Q06830 199 aaKnown RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 TUBB3Q13509 450 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 IL11RAQ14626 422 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 TBC1D25Q3MII6 688 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CDKL4Q5MAI5 379 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 THEMIS2Q5TEJ8 643 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 PRAMEF13Q5VWM6 474 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 ICE2Q659A1 982 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CAPN13Q6MZZ7 669 aaPredicted RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 KLC3Q6P597 504 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CYB5D1Q6P9G0 228 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 FIGLAQ6QHK4 219 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CEACAM20Q6UY09 585 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 CLEC14AQ86T13 490 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 BPHLQ86WA6 291 aaPredicted RBP11.5□□□□□ -0.57
VPS13D-204ENST00000469054 RHEBL1Q8TAI7 183 aa11.5□□□□□ -0.57
VPS13D-204ENST00000469054 EPS8L3Q8TE67 593 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms