RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 CATP04040 527 aaKnown RBP16.79■□□□□ 0.28
COL7A1-206ENST00000466591 OGNP20774 298 aaKnown RBP16.79■□□□□ 0.28
COL7A1-206ENST00000466591 PSMB5P28074 263 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 DHX34Q14147 1143 aaKnown RBP16.79■□□□□ 0.28
COL7A1-206ENST00000466591 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 CTSL3PQ5NE16 218 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 WASHC2DQ5SRD0 308 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 FCRL6Q6DN72 434 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 ZNF470Q6ECI4 717 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 MRPL14Q6P1L8 145 aaKnown RBP16.79■□□□□ 0.28
COL7A1-206ENST00000466591 SHISA6Q6ZSJ9 500 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 OVCH1Q7RTY7 1134 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 PPP1R32Q7Z5V6 425 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 ADCK2Q7Z695 626 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 OR2L3Q8NG85 312 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 MAGOHBQ96A72 148 aaKnown RBP16.79■□□□□ 0.28
COL7A1-206ENST00000466591 CABS1Q96KC9 395 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 WDR54Q9H977 334 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 FBXL4Q9UKA2 621 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 B3GNT3Q9Y2A9 372 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 MAD1L1Q9Y6D9 718 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 MAU2Q9Y6X3 613 aa16.79■□□□□ 0.28
COL7A1-206ENST00000466591 H3BMH7 237 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 GOLGA8MH3BSY2 632 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 ALBP02768 609 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 PKMP14618 531 aaKnown RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 MMP11P24347 488 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 OR1D4P47884 311 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 GLRBP48167 497 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 FOXL2P58012 376 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 GRB7Q14451 532 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 TUBB8Q3ZCM7 444 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 CCSMST1Q4G0I0 132 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 PRR30Q53SZ7 412 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 THEMIS2Q5TEJ8 643 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 KIAA0930Q6ICG6 404 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 NEPROQ6NW34 567 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 ZNF662Q6ZS27 426 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 LRRC8AQ8IWT6 810 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 RBMXL3Q8N7X1 1067 aaKnown RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 OR9A1PQ8NGU1 263 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 PRR7Q8TB68 274 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 LPGAT1Q92604 370 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 RERGQ96A58 199 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 CRB3Q9BUF7 120 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 MENTQ9BUN1 341 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 ZNF304Q9HCX3 659 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 MRPS30Q9NP92 439 aaKnown RBP16.78■□□□□ 0.28
COL7A1-206ENST00000466591 HECTD1Q9ULT8 2610 aa16.78■□□□□ 0.28
COL7A1-206ENST00000466591 GOLGA6L10A0A0M3HER8 536 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 TCRBV7S3A2A0A539 114 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 MAGEB16A2A368 324 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 KRT87PA6NCN2 255 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 SDR42E2A6NKP2 422 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 PRPF4O43172 522 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 AVILO75366 819 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 USP1O94782 785 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 UMODP07911 640 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 FBLP22087 321 aaKnown RBP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 ATP5DP30049 168 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 HSD17B2P37059 387 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 CARSP49589 748 aaKnown RBP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 SRSF1Q07955 248 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 NKG7Q16617 165 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 TYSND1Q2T9J0 566 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 MUM1Q2TAK8 710 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 KLHL38Q2WGJ6 581 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 AGAP7PQ5VUJ5 663 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 PRSS58Q8IYP2 241 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 GABPB2Q8TAK5 448 aaPredicted RBP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 SMPDL3AQ92484 453 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 NACC2Q96BF6 587 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 MIEF2Q96C03 454 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 AGAP4Q96P64 663 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 ZFYVE21Q9BQ24 234 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 DPH7Q9BTV6 452 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 EPS8L2Q9H6S3 715 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 XAB2Q9HCS7 855 aaKnown RBP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 SEMA3GQ9NS98 782 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 INTS10Q9NVR2 710 aaKnown RBP16.77■□□□□ 0.28
COL7A1-206ENST00000466591 CDC14AQ9UNH5 594 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 PPP2R2CQ9Y2T4 447 aa16.77■□□□□ 0.28
COL7A1-206ENST00000466591 PABPN1LA6NDY0 278 aaKnown RBP16.76■□□□□ 0.27
COL7A1-206ENST00000466591 MAP2K7O14733 419 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 ANXA5P08758 320 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 KCTD19Q17RG1 926 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-206ENST00000466591 PRAMEF13Q5VWM6 474 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 ARMC3Q5W041 872 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 PRMT9Q6P2P2 845 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 SUSD1Q6UWL2 747 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 CILP2Q8IUL8 1156 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 PARP9Q8IXQ6 854 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 CISD2Q8N5K1 135 aaKnown RBP16.76■□□□□ 0.27
COL7A1-206ENST00000466591 PRELID2Q8N945 189 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 HMGCLL1Q8TB92 370 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 GRK7Q8WTQ7 553 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 SSC4DQ8WTU2 575 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.76■□□□□ 0.27
COL7A1-206ENST00000466591 PBKQ96KB5 322 aa16.76■□□□□ 0.27
COL7A1-206ENST00000466591 CNDP1Q96KN2 507 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms