RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MIPEPQ99797 713 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 ZBTB20Q9HC78 741 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-206ENST00000466532 SLC6A20Q9NP91 592 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 ASF1BQ9NVP2 202 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 SYBUQ9NX95 663 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 TSR3Q9UJK0 312 aaKnown RBP18.35■□□□□ 0.53
COL9A3-206ENST00000466532 FBXL4Q9UKA2 621 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
COL9A3-206ENST00000466532 CTSVO60911 334 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 ALOX12BO75342 701 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 VAPBO95292 243 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 FGGP02679 453 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 RNF224P0DH78 156 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 CCNFP41002 786 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 VSX2P58304 361 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-206ENST00000466532 NR6A1Q15406 480 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 CES3Q6UWW8 571 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 SHISA6Q6ZSJ9 500 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 METTL27Q8N6F8 245 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-206ENST00000466532 HMGCLL1Q8TB92 370 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 MFSD3Q96ES6 412 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 SPSB2Q99619 263 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 SLC26A1Q9H2B4 701 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 SOX17Q9H6I2 414 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-206ENST00000466532 MRM3Q9HC36 420 aaKnown RBP18.34■□□□□ 0.53
COL9A3-206ENST00000466532 ENAMQ9NRM1 1142 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 CTSFQ9UBX1 484 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 FAM169AQ9Y6X4 670 aa18.34■□□□□ 0.53
COL9A3-206ENST00000466532 FITM1A5D6W6 292 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 GOLGA8KD6RF30 607 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 GOLGA8TH3BQL2 631 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 SOCS6O14544 535 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 SRPX2O60687 465 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-206ENST00000466532 ARNTP27540 789 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 FMO4P31512 558 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 OR1D4P47884 311 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 KCNJ1P48048 391 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 FAM214AQ32MH5 1076 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 WASHC2DQ5SRD0 308 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 PRAMEF13Q5VWM6 474 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 FRMPD2BQ6IN97 320 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 MRNIPQ6NTE8 343 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 LRRC8BQ6P9F7 803 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 SDCCAG8Q86SQ7 713 aaPredicted RBP18.33■□□□□ 0.52
COL9A3-206ENST00000466532 OR2L3Q8NG85 312 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 MAIP1Q8WWC4 291 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 INPP5DQ92835 1189 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 BIRC8Q96P09 236 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 KIFC1Q9BW19 673 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 LZTFL1Q9NQ48 299 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 NXT1Q9UKK6 140 aaKnown RBP18.33■□□□□ 0.52
COL9A3-206ENST00000466532 HS3ST3B1Q9Y662 390 aa18.33■□□□□ 0.52
COL9A3-206ENST00000466532 A0A0J9YVX5 310 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 HYKKA2RU49 373 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 NRP2O60462 931 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 NIPSNAP2O75323 286 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 TPSB2P20231 275 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 TPSAB1Q15661 275 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 RBBP7Q16576 425 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 KCTD19Q17RG1 926 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-206ENST00000466532 RNF187Q5TA31 235 aaPredicted RBP18.32■□□□□ 0.52
COL9A3-206ENST00000466532 Q6ZS92 163 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 DTWD1Q8N5C7 304 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 OR2A1Q8NGT9 310 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 LPGAT1Q92604 370 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 FAM136AQ96C01 138 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 IL1RAPL1Q9NZN1 696 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 SPATA7Q9P0W8 599 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 SOX13Q9UN79 622 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 KLK4Q9Y5K2 254 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 MAU2Q9Y6X3 613 aa18.32■□□□□ 0.52
COL9A3-206ENST00000466532 A0A1W2PPV9 198 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 TCRBV7S3A2A0A539 114 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 H3BMM5 538 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 PFDN6O15212 129 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 MATN4O95460 622 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 CBX6O95503 412 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 GLRBP48167 497 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 TERF1P54274 439 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 CDK16Q00536 496 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 FASTKQ14296 549 aaKnown RBP18.31■□□□□ 0.52
COL9A3-206ENST00000466532 TYSND1Q2T9J0 566 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 TUBB8Q3ZCM7 444 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 IRAK1BP1Q5VVH5 260 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 KIRREL2Q6UWL6 708 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 RNF44Q7L0R7 432 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 CUZD1Q86UP6 607 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 ZNF304Q9HCX3 659 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 SEMA3GQ9NS98 782 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 ZC3H7BQ9UGR2 993 aaKnown RBP18.31■□□□□ 0.52
COL9A3-206ENST00000466532 CRYL1Q9Y2S2 319 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 PCDHGA10Q9Y5H3 936 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 COPG1Q9Y678 874 aaKnown RBP18.31■□□□□ 0.52
COL9A3-206ENST00000466532 CNTRLQ7Z7A1 2325 aa18.31■□□□□ 0.52
COL9A3-206ENST00000466532 LOC105369274A0A096LPK9 316 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 LOC102723532A0A0G2JNH3 316 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 A1L4Q6 167 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 CEP104O60308 925 aa18.3■□□□□ 0.52
COL9A3-206ENST00000466532 MED26O95402 600 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms