RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CHRNA10Q9GZZ6 450 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 OCIAD1Q9NX40 245 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 SIDT1Q9NXL6 827 aaKnown RBP19.09■□□□□ 0.65
COL9A3-204ENST00000463487 RNF112Q9ULX5 631 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 PCDHGA3Q9Y5H0 932 aa19.09■□□□□ 0.65
COL9A3-204ENST00000463487 A0A1W2PNU3 283 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-204ENST00000463487 SYCE1LA8MT33 242 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 PRICKLE3O43900 615 aaPredicted RBP19.08■□□□□ 0.64
COL9A3-204ENST00000463487 MSL3P1P0C860 447 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 COL6A2P12110 1019 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 TBPL1P62380 186 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 FASTKQ14296 549 aaKnown RBP19.08■□□□□ 0.64
COL9A3-204ENST00000463487 PPP1R3AQ16821 1122 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 KIF26BQ2KJY2 2108 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 TSNAXIP1Q2TAA8 658 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 CDKL4Q5MAI5 379 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 SUSD1Q6UWL2 747 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 CLEC14AQ86T13 490 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 PPP1R3BQ86XI6 285 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 SPATA6LQ8N4H0 392 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 BMPERQ8N8U9 685 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 PPFIBP2Q8ND30 876 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 OR2L3Q8NG85 312 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 FLVCR1-AS1Q8TAF5 88 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 USP7Q93009 1102 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 ZUFSPQ96AP4 578 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 MIPEPQ99797 713 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 HAUS8Q9BT25 410 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 ACAT2Q9BWD1 397 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 MRPS30Q9NP92 439 aaKnown RBP19.08■□□□□ 0.64
COL9A3-204ENST00000463487 FGF21Q9NSA1 209 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 ANKMY1Q9P2S6 941 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 RARRES3Q9UL19 164 aa19.08■□□□□ 0.64
COL9A3-204ENST00000463487 CDRT15L2A8MXV6 281 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TARM1B6A8C7 271 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 CDH16O75309 829 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 KLHL2O95198 593 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 NUDT17P0C025 328 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 EBLN1P0CF75 366 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 PVRP15151 417 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TFEBP19484 476 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 HRH2P25021 359 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 NAE1Q13564 534 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 ACAP2Q15057 778 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 RASA2Q15283 850 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TGFBIQ15582 683 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 ZC3H12BQ5HYM0 836 aaKnown RBP19.07■□□□□ 0.64
COL9A3-204ENST00000463487 PRAMEF13Q5VWM6 474 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 ICE2Q659A1 982 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 MBOAT1Q6ZNC8 495 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TIFABQ6ZNK6 161 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 LCA5Q86VQ0 697 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TDRPQ86YL5 185 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 RIBC1Q8N443 379 aaPredicted RBP19.07■□□□□ 0.64
COL9A3-204ENST00000463487 MREGQ8N565 214 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 OR2A1Q8NGT9 310 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 KCTD4Q8WVF5 259 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 PPM1MQ96MI6 270 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 KLHL25Q9H0H3 589 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 CNOT10Q9H9A5 744 aaKnown RBP19.07■□□□□ 0.64
COL9A3-204ENST00000463487 ASCL3Q9NQ33 180 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 ABCF3Q9NUQ8 709 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 CD274Q9NZQ7 290 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 TAC3Q9UHF0 121 aa19.07■□□□□ 0.64
COL9A3-204ENST00000463487 A0A1W2PPV9 198 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 C1QTNF9BB2RNN3 333 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 C1QTNF9P0C862 333 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 FOLR1P15328 257 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 MAGP20916 626 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 PSMB5P28074 263 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 GCAP28676 217 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ETV5P41161 510 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 MAGEA12P43365 314 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 PCBP4P57723 403 aaKnown RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 SH3BP2P78314 561 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 PRDX1Q06830 199 aaKnown RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 KCNAB1Q14722 419 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 FIGLAQ6QHK4 219 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 RHEBL1Q8TAI7 183 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 MDM1Q8TC05 714 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ACMSDQ8TDX5 336 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ZCCHC14Q8WYQ9 949 aaKnown RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 FGF11Q92914 225 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ALKBH8Q96BT7 664 aaKnown RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 NXNL1Q96CM4 212 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 FCRL4Q96PJ5 515 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 TMEM121BQ9BXQ6 578 aaPredicted RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 UNKQ9C0B0 810 aaKnown RBP19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ATG10Q9H0Y0 220 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 ALG9Q9H6U8 611 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 TBK1Q9UHD2 729 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 SERTAD3Q9UJW9 196 aa19.06■□□□□ 0.64
COL9A3-204ENST00000463487 PMS2P1A4D2B8 440 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 SMIM23A6NLE4 172 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 PRAMEF10O60809 474 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 KERAO60938 352 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 IPO13O94829 963 aaKnown RBP19.05■□□□□ 0.64
COL9A3-204ENST00000463487 SHBGP04278 402 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 FGF5P12034 268 aa19.05■□□□□ 0.64
COL9A3-204ENST00000463487 KRT15P19012 456 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms