RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 SLC26A3P40879 764 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 GLRBP48167 497 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 TBPL1P62380 186 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 CYP4F3Q08477 520 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 NAE1Q13564 534 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
HDLBP-229ENST00000460826 C18orf21Q32NC0 220 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-229ENST00000460826 KIAA1614Q5VZ46 1190 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 TIFABQ6ZNK6 161 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 TDRPQ86YL5 185 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 CARFQ8N187 725 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 C19orf47Q8N9M1 422 aaKnown RBP13.49□□□□□ -0.25
HDLBP-229ENST00000460826 MDM1Q8TC05 714 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 FBXL8Q96CD0 374 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 NXPE2Q96DL1 559 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 ATOH8Q96SQ7 321 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 CTRCQ99895 268 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 TRIM54Q9BYV2 358 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 NMRAL1Q9HBL8 299 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 FAM60AQ9NP50 221 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 SOHLH2Q9NX45 425 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 AKAP7Q9P0M2 348 aaPredicted RBP13.49□□□□□ -0.25
HDLBP-229ENST00000460826 TAC3Q9UHF0 121 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 SH2B3Q9UQQ2 575 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 PCDHGA8Q9Y5G5 932 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 AK5Q9Y6K8 562 aa13.49□□□□□ -0.25
HDLBP-229ENST00000460826 FER1L5A0AVI2 2057 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 IQANK1A0A1B0GTG1 560 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 A0A1W2PPM1 405 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 NCF1BA6NI72 391 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-229ENST00000460826 ZNF839A8K0R7 811 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 NCF1CA8MVU1 366 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-229ENST00000460826 B4E171 279 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 C9orf172C9J069 976 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 HCRTR1O43613 425 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 NCF1P14598 390 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-229ENST00000460826 RPA3P35244 121 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-229ENST00000460826 TSPAN7P41732 249 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 ARL4DP49703 201 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 HSD11B2P80365 405 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 CDKL1Q00532 357 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 MC2RQ01718 297 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 TGFBIQ15582 683 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 GPR19Q15760 415 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 LGSNQ5TDP6 509 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 FRA10AC1Q70Z53 315 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 CCDC91Q7Z6B0 441 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 CLEC14AQ86T13 490 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 GPSM1Q86YR5 675 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 OR2L3Q8NG85 312 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 USP7Q93009 1102 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 EXT2Q93063 718 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 SLC22A18Q96BI1 424 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 ALKBH8Q96BT7 664 aaKnown RBP13.48□□□□□ -0.25
HDLBP-229ENST00000460826 PYCR2Q96C36 320 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 MED8Q96G25 268 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 SLC46A1Q96NT5 459 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 SGPP1Q9BX95 441 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 SLC6A20Q9NP91 592 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 PCMTD2Q9NV79 361 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 SLC39A1Q9NY26 324 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 RNF112Q9ULX5 631 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 PLAAQ9Y263 795 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 PCDHB11Q9Y5F2 797 aa13.48□□□□□ -0.25
HDLBP-229ENST00000460826 URB1O60287 2271 aaKnown RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 IGKV1-8A0A0C4DH67 115 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 TLDC2A0PJX2 215 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 PABPN1LA6NDY0 278 aaKnown RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 GOLGA8RI6L899 631 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 UBXN8O00124 270 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 CTIFO43310 598 aaKnown RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 DXOO77932 396 aaKnown RBP13.47□□□□□ -0.25
HDLBP-229ENST00000460826 CAPNS1P04632 268 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 ANXA5P08758 320 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 GRIA3P42263 894 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 GABRA4P48169 554 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FOXK2Q01167 660 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FOXM1Q08050 763 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FAM83EQ2M2I3 478 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FBXO48Q5FWF7 155 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 TECRLQ5HYJ1 363 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 PRAMEF13Q5VWM6 474 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 ICE2Q659A1 982 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 FIGLAQ6QHK4 219 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 IGF2-ASQ6U949 168 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 CDHR3Q6ZTQ4 885 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 OR56A3Q8NH54 315 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 RHBDF1Q96CC6 855 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 EGFL8Q99944 293 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 TMEM79Q9BSE2 394 aa13.47□□□□□ -0.25
HDLBP-229ENST00000460826 PPCSQ9HAB8 311 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms