RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 ZNF776Q68DI1 518 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 HIST2H2AA3Q6FI13 130 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 ADGRG6Q86SQ4 1221 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 KBTBD2Q8IY47 623 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 RLN3Q8WXF3 142 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 NEIL2Q969S2 332 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PANX1Q96RD7 426 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PKP2Q99959 881 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 ACPTQ9BZG2 426 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 THAP10Q9P2Z0 257 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 NCKAP1Q9Y2A7 1128 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 FADS3Q9Y5Q0 445 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 SNX8Q9Y5X2 465 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PRAMEF33A0A0G2JMD5 474 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 H7BY64 318 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 RTCAO00442 366 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 E2F6O75461 281 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 KCNH1O95259 989 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 RASGRP1O95267 797 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 ANXA4P09525 319 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 MYCLP1P12525 358 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PSMB5P28074 263 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 GSK3BP49841 420 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 AP1S2P56377 157 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 GRSF1Q12849 480 aaKnown RBP eCLIP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 MED21Q13503 144 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 NANOGP8Q6NSW7 305 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PGM2L1Q6PCE3 622 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 FAM83HQ6ZRV2 1179 aaPredicted RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 CHSY3Q70JA7 882 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 GPR180Q86V85 440 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 LRRTM4Q86VH4 590 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 HID1Q8IV36 788 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 OR7A2PQ8NGA2 310 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 RPLP0P6Q8NHW5 317 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 ZNF480Q8WV37 535 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 SLC13A3Q8WWT9 602 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 FAM120BQ96EK7 910 aaKnown RBP9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 PRAP1Q96NZ9 151 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 NANOGQ9H9S0 305 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 MRGBPQ9NV56 204 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 DKK3Q9UBP4 350 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 CROCCQ5TZA2 2017 aa9.08□□□□□ -0.96
NUDCD3-203ENST00000460110 AREL1O15033 823 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 LSM1O15116 133 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 MAP3K13O43283 966 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CDH1P12830 882 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PSMA4P25789 261 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 KLC1Q07866 573 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 HERC3Q15034 1050 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 SFT2D3Q587I9 215 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 GALNT10Q86SR1 603 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 TMIEQ8NEW7 156 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FAM110BQ8TC76 370 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 TSACCQ96A04 125 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CCDC138Q96M89 665 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 NSMCE2Q96MF7 247 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CCDC177Q9NQR7 707 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FBXO10Q9UK96 956 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PCDHGB4Q9UN71 923 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PCYT1BQ9Y5K3 369 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PLXNA4Q9HCM2 1894 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 DOCK9Q9BZ29 2069 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 SPTBP11277 2137 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FAM234BA2RU67 622 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PDLIM1O00151 329 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 RFXANKO14593 260 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PGRP06401 933 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 SLC6A2P23975 617 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FCARP24071 287 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CTHP32929 405 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 PLA2G16P53816 162 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 TPD52P55327 224 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 EMX2Q04743 252 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ZBTB49Q6ZSB9 765 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 GALNT13Q8IUC8 556 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 OR10G6Q8NH81 332 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 RAD51AP1Q96B01 352 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CENPKQ9BS16 269 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 SORBS1Q9BX66 1292 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 BATF3Q9NR55 127 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CMTM6Q9NX76 183 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 VPS29Q9UBQ0 182 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 U3KQV3 271 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 DNAH14Q0VDD8 3507 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FEZF1A0PJY2 475 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ISM1B1AKI9 464 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 RNGTTO60942 597 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 FKBP9O95302 570 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ATP6V1B1P15313 513 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ZNF23P17027 643 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 AK4P27144 223 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 RANBP1P43487 201 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ACADVLP49748 655 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 HNMTP50135 292 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 CDK3Q00526 305 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 TFF2Q03403 129 aa9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 ZXDCQ2QGD7 858 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-203ENST00000460110 GLYATQ6IB77 296 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms