RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 C3AR1Q16581 482 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 KRTAP21-3Q3LHN1 58 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 MFSD4BQ5TF39 518 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 ZNF324BQ6AW86 544 aaPredicted RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 CAVIN1Q6NZI2 390 aaKnown RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 TTC23LQ6PF05 361 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 MFSD7Q6UXD7 560 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 NEK10Q6ZWH5 1172 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 COX15Q7KZN9 410 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 ZNF295-AS1Q8N0V1 137 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 DNAJB8Q8NHS0 232 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 SLC35G2Q8TBE7 412 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 POM121Q96HA1 1249 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 DNAJC1Q96KC8 554 aaKnown RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 CABS1Q96KC9 395 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 QKIQ96PU8 341 aaKnown RBP eCLIP7.54□□□□□ -1.2
HPS4-207ENST00000459918 TBL1YQ9BQ87 522 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 BPIFA3Q9BQP9 254 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 MESP1Q9BRJ9 268 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 TRIM56Q9BRZ2 755 aaKnown RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 TSSK1BQ9BXA7 367 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 COQ3Q9NZJ6 369 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 TRPC4Q9UBN4 977 aa7.54□□□□□ -1.2
HPS4-207ENST00000459918 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
HPS4-207ENST00000459918 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.54□□□□□ -1.2
HPS4-207ENST00000459918 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 A0A0J9YVX5 310 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 HACD1B0YJ81 288 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 RASGRF2O14827 1237 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 FFAR3O14843 346 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 GPR42O15529 346 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 TTI1O43156 1089 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PRPF4O43172 522 aaKnown RBP eCLIP7.53□□□□□ -1.2
HPS4-207ENST00000459918 BMP10O95393 424 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 WDPCPO95876 746 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 S1PR4O95977 384 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 CELA2AP08217 269 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 ANXA5P08758 320 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PRSS56P0CW18 603 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 COX6A1P12074 109 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 DRD2P14416 443 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 AGAP20933 346 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PSMB4P28070 264 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PEBP1P30086 187 aaKnown RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 PKLRP30613 574 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 CDKN2BP42772 138 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 SLC1A1P43005 524 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 ZNF140P52738 457 aaPredicted RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 EMP2P54851 167 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PPP2R2AP63151 447 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 ADORA2A-AS1P86434 159 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 ALDH6A1Q02252 535 aaKnown RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 PLOD1Q02809 727 aaPredicted RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 CACNG1Q06432 222 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 HSPA14Q0VDF9 509 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 NR1I3Q14994 352 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 IQCB1Q15051 598 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 SLC18A3Q16572 532 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 WASHC2DQ5SRD0 308 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PRMT9Q6P2P2 845 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 RHOT2Q8IXI1 618 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 EID3Q8N140 333 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 FAM98AQ8NCA5 519 aaKnown RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 FLVCR1-AS1Q8TAF5 88 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 HAS2Q92819 552 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 IQCDQ96DY2 449 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 C14orf79Q96F83 325 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 PPP1R2P1Q96PQ5 205 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 TTC1Q99614 292 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 C10orf88Q9H8K7 445 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 MCCC2Q9HCC0 563 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 LUC7LQ9NQ29 371 aaKnown RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 KLHL1Q9NR64 748 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 ZNHIT6Q9NWK9 470 aaKnown RBP7.53□□□□□ -1.2
HPS4-207ENST00000459918 STMN3Q9NZ72 180 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 CAPN11Q9UMQ6 739 aa7.53□□□□□ -1.2
HPS4-207ENST00000459918 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
HPS4-207ENST00000459918 MTORP42345 2549 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 IGLV3-16A0A075B6K0 115 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 VSTM2BA6NLU5 285 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 AGAP14A8MT82 685 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 IDSB3KWA1 339 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 NPIPA5E9PKD4 350 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 APOA4P06727 396 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 CD99P14209 185 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 CD9P21926 228 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 COMTP21964 271 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 MSNP26038 577 aaKnown RBP7.52□□□□□ -1.21
HPS4-207ENST00000459918 RBL1P28749 1068 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
HPS4-207ENST00000459918 SOX11P35716 441 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 UBASH3AP57075 661 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 CSNK1G2P78368 415 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 TSTA3Q13630 321 aaPredicted RBP7.52□□□□□ -1.21
HPS4-207ENST00000459918 SPARCL1Q14515 664 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 POU6F1Q14863 301 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 TMED2Q15363 201 aa7.52□□□□□ -1.21
HPS4-207ENST00000459918 DBN1Q16643 649 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms