RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 SLC6A13Q9NSD5 602 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 RSL24D1Q9UHA3 163 aaKnown RBP14.64□□□□□ -0.07
LDLR-202ENST00000455727 PPT2Q9UMR5 302 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 WNT6Q9Y6F9 365 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 XYLBO75191 536 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 CREG1O75629 220 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 FGBP02675 491 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ALBP02768 609 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ASLP04424 464 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 XPAP23025 273 aaPredicted RBP14.64□□□□□ -0.07
LDLR-202ENST00000455727 ITPKAP23677 461 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 CDH15P55291 814 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 IRF8Q02556 426 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ABHD18Q0P651 414 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 MYBPC3Q14896 1274 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 AP1ARQ63HQ0 302 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ENPP6Q6UWR7 440 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 DNAJC14Q6Y2X3 702 aaPredicted RBP14.64□□□□□ -0.07
LDLR-202ENST00000455727 GCNT7Q6ZNI0 430 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 GPR180Q86V85 440 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ZDHHC13Q8IUH4 622 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 SVOPLQ8N434 492 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 FAM86B1Q8N7N1 296 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 NAT16Q8N8M0 369 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 FBXO30Q8TB52 745 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 SORCS1Q8WY21 1168 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 GLYATL1Q969I3 302 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 FAM162AQ96A26 154 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 SLC47A1Q96FL8 570 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 REXO5Q96IC2 774 aaKnown RBP14.64□□□□□ -0.07
LDLR-202ENST00000455727 TSSK3Q96PN8 268 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ATG10Q9H0Y0 220 aa14.64□□□□□ -0.07
LDLR-202ENST00000455727 ARHGEF33A8MVX0 844 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 H0Y858 1186 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 PSMD11O00231 422 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 ATG13O75143 517 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 MMP12P39900 470 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 TRPC1P48995 793 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 PRLHRP49683 370 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 C21orf58P58505 322 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 ESRRGP62508 458 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SRSF11Q05519 484 aaKnown RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 GTDC1Q4AE62 458 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 TMEM259Q4ZIN3 620 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 OTUD3Q5T2D3 398 aaPredicted RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 THOC6Q86W42 341 aaKnown RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 PHACTR4Q8IZ21 702 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 RASGEF1AQ8N9B8 481 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 WDR20Q8TBZ3 569 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SPPL3Q8TCT6 385 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 POF1BQ8WVV4 589 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 TMEM159Q96B96 161 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 FAM120BQ96EK7 910 aaKnown RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 ZSWIM3Q96MP5 696 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 RAD9AQ99638 391 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 TBCDQ9BTW9 1192 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SLC5A10A0PJK1 596 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 OR2AG2A6NM03 316 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 G3V2T6 193 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 PER2O15055 1255 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 CISD3P0C7P0 127 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 PCNAP12004 261 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 HSD3B1P14060 373 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 HSD3B2P26439 372 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 HNF4AP41235 474 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 EPS8Q12929 822 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 ABRQ12979 859 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 PON2Q15165 354 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 NKG7Q16617 165 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SLC44A4Q53GD3 710 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 LIPIQ6XZB0 460 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 WFIKKN2Q8TEU8 576 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 TMIGD2Q96BF3 282 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SDCCAG3Q96C92 435 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 AURKBQ96GD4 344 aaPredicted RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 APOLD1Q96LR9 279 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 CCM2Q9BSQ5 444 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 INPP5KQ9BT40 448 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 EPHX3Q9H6B9 360 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 SPATA6Q9NWH7 488 aaPredicted RBP14.63□□□□□ -0.07
LDLR-202ENST00000455727 VPS29Q9UBQ0 182 aa14.63□□□□□ -0.07
LDLR-202ENST00000455727 H0YIV9 168 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 TSPAN6O43657 245 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 RECQL5O94762 991 aaPredicted RBP14.62□□□□□ -0.07
LDLR-202ENST00000455727 PRKD3O94806 890 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 SEC24DO94855 1032 aaPredicted RBP14.62□□□□□ -0.07
LDLR-202ENST00000455727 CLIC3O95833 236 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 CST1P01037 141 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 CATP04040 527 aaKnown RBP14.62□□□□□ -0.07
LDLR-202ENST00000455727 THRBP10828 461 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 SLC5A2P31639 672 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 KIR3DL1P43629 444 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 PGS1Q32NB8 556 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 ZBED5Q49AG3 693 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 SYTL3Q4VX76 610 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.62□□□□□ -0.07
LDLR-202ENST00000455727 CCNYL2Q5T2Q4 361 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 ERAP2Q6P179 960 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 STK32CQ86UX6 486 aa14.62□□□□□ -0.07
LDLR-202ENST00000455727 KIAA1958Q8N8K9 716 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms