RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 THAP5Q7Z6K1 395 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CNGA4Q8IV77 575 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC103Q8IW40 242 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 TMEM151BQ8IW70 566 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 RBM12BQ8IXT5 1001 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 D2HGDHQ8N465 521 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CLDN19Q8N6F1 224 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 LMNTD1Q8N9Z9 388 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 OR2L2Q8NH16 312 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 OR1L3Q8NH93 324 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 DTX3LQ8TDB6 740 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 LCN9Q8WX39 176 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 ALG3Q92685 438 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 MIB2Q96AX9 1013 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF501Q96CX3 271 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CLIP3Q96DZ5 547 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 DCUN1D1Q96GG9 259 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 RBM41Q96IZ5 413 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF514Q96K75 400 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 DNAJC1Q96KC8 554 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 RMDN2Q96LZ7 410 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 TUBB2BQ9BVA1 445 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 OSBPL8Q9BZF1 889 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 GBA3Q9H227 469 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CHST8Q9H2A9 424 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 SRMSQ9H3Y6 488 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 KIR3DX1Q9H7L2 352 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 PRDM7Q9NQW5 492 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 KCND1Q9NSA2 647 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 SOHLH2Q9NX45 425 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 LUZP4Q9P127 313 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 SEMA5BQ9P283 1151 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 ANKMY1Q9P2S6 941 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CRLS1Q9UJA2 301 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 TRHDEQ9UKU6 1024 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 ACSL5Q9ULC5 683 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 PACSIN2Q9UNF0 486 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 FARSAQ9Y285 508 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 MAN2B2Q9Y2E5 1009 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 PCDHGA6Q9Y5G7 932 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 PCDHA3Q9Y5H8 950 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 EPN1Q9Y6I3 576 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 PRSS21Q9Y6M0 314 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 COLEC10Q9Y6Z7 277 aa4.55□□□□□ -1.68
GTF3C3-208ENST00000455546 CFAP46Q8IYW2 2715 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 HIVEP3Q5T1R4 2406 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TCRBV7S2A1N4TA0A589 114 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 GSAPA4D1B5 854 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 GOLGA6L3A6NEY3 463 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 C5orf60A6NFR6 353 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TLCD2A6NGC4 264 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 OR51F1A6NGY5 319 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 AGAP14A8MT82 685 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TMEM150CB9EJG8 249 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 RFPL1O75677 317 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ZBTB11O95625 1053 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CRTAMO95727 393 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 MT-ND3P03897 115 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 KLK3P07288 261 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CAPN1P07384 714 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC35G4P0C7Q5 338 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TPBGLP0DKB5 382 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CD8BP10966 210 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ST6GAL1P15907 406 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 GNLYP22749 145 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 MC4RP32245 332 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CTNNA1P35221 906 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 UQCRFS1P47985 274 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 LMAN1P49257 510 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PRLHRP49683 370 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF140P52738 457 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PMS2P54278 862 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CSE1LP55060 971 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ITGA1P56199 1179 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 RWDD2BP57060 319 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PDE1BQ01064 536 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ABRQ12979 859 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PRKAA1Q13131 559 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 RAPSNQ13702 412 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 LAMB3Q13751 1172 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 UGT8Q16880 541 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 KCTD19Q17RG1 926 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 BCL7AQ4VC05 210 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC38Q502W7 563 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF789Q5FWF6 425 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ZC3H12BQ5HYM0 836 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TMTC4Q5T4D3 741 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ITPRIPL1Q6GPH6 555 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 C11orf63Q6NUN7 778 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 RAD9BQ6WBX8 426 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF517Q6ZMY9 492 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 RNF111Q6ZNA4 994 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SNX20Q7Z614 316 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PRUNE1Q86TP1 453 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 TRIM73Q86UV7 250 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 SERPINA9Q86WD7 417 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 OOSP2Q86WS3 158 aa4.54□□□□□ -1.68
GTF3C3-208ENST00000455546 PIANPQ8IYJ0 282 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms