RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 MALT1Q9UDY8 824 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.53
SEC16A-207ENST00000453963 ISPDA4D126 451 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 PCP4L1A6NKN8 68 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 MAGEB3O15480 346 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 IVDP26440 423 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 XKP51811 444 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 SLC10A7Q0GE19 358 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 MAB21L1Q13394 359 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 KIAA1614Q5VZ46 1190 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 SYCE2Q6PIF2 218 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 TMEM192Q8IY95 271 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 KIAA1191Q96A73 305 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 FUBP3Q96I24 572 aaKnown RBP eCLIP11.77□□□□□ -0.53
SEC16A-207ENST00000453963 TMEM74Q96NL1 305 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 DERL2Q9GZP9 239 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 TM9SF3Q9HD45 589 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 THUMPD1Q9NXG2 353 aaKnown RBP11.77□□□□□ -0.53
SEC16A-207ENST00000453963 MED11Q9P086 117 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 EIF3KQ9UBQ5 218 aaKnown RBP11.77□□□□□ -0.53
SEC16A-207ENST00000453963 TLR6Q9Y2C9 796 aa11.77□□□□□ -0.53
SEC16A-207ENST00000453963 LCHNA4D1U4 455 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 TLR4O00206 839 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CCRL2O00421 344 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SDHDO14521 159 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SERPINA3P01011 423 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 VIPP01282 170 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 ALDOAP04075 364 aaKnown RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CHRM5P08912 532 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 IGFALSP35858 605 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CCL14Q16627 93 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 FBXO42Q6P3S6 717 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 ZBED6CLQ96FA7 236 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 IRF2BPLQ9H1B7 796 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 VPS29Q9UBQ0 182 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 FZD4Q9ULV1 537 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 STBD1O95210 358 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 PAPSS2O95340 614 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 POP4O95707 220 aaKnown RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 EFNA1P20827 205 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 INCA1Q0VD86 236 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 DNASE1L3Q13609 305 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SIX1Q15475 284 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 RANBP3LQ86VV4 465 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CIR1Q86X95 450 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CPA6Q8N4T0 437 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 NATD1Q8N6N6 113 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 KBTBD7Q8WVZ9 684 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 ZFP3Q96NJ6 502 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 PEBP4Q96S96 227 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 AKAP8O43823 692 aaKnown RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 HCN1O60741 890 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 RASAL1O95294 804 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CLIC3O95833 236 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 HMGN1P05114 100 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 PPP1R8Q12972 351 aaKnown RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CEACAM7Q14002 265 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SPRED3Q2MJR0 410 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 ZNF678Q5SXM1 525 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 GET4Q7L5D6 327 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 FAM124AQ86V42 546 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 KLHL36Q8N4N3 616 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 C2CD4AQ8NCU7 369 aaPredicted RBP11.76□□□□□ -0.53
SEC16A-207ENST00000453963 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SLC35G5Q96KT7 338 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 C5orf34Q96MH7 638 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SLC2A6Q9UGQ3 507 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 GRIP1Q9Y3R0 1128 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 A0A1W2PRB8 838 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 OR2AG2A6NM03 316 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 HPRP00739 348 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 TFPIP10646 304 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 HLCSP50747 726 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 CRB2Q5IJ48 1285 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SIRPB2Q5JXA9 342 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 PAMR1Q6UXH9 720 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 JAZF1Q86VZ6 243 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 LINC00471Q8N535 108 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 FBXO22Q8NEZ5 403 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 PLD4Q96BZ4 506 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 BRINP2Q9C0B6 783 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 SLC32A1Q9H598 525 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 COLEC10Q9Y6Z7 277 aa11.76□□□□□ -0.53
SEC16A-207ENST00000453963 UNCXA6NJT0 531 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 PDCD5O14737 125 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 PDPK1O15530 556 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 PCDH7O60245 1069 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 RPL17P18621 184 aaKnown RBP11.75□□□□□ -0.53
SEC16A-207ENST00000453963 GSTM3P21266 225 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 HSPB3Q12988 150 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
SEC16A-207ENST00000453963 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 CHST9Q7L1S5 443 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 SLC9A6Q92581 669 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 FRMD6Q96NE9 622 aa11.75□□□□□ -0.53
SEC16A-207ENST00000453963 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms