RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SNAP47Q5SQN1 464 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 VPS37AQ8NEZ2 397 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ARRDC2Q8TBH0 407 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 NELL1Q92832 810 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 EGLN2Q96KS0 407 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 CTRCQ99895 268 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 MGAT4DA6NG13 374 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 AGAP5A6NIR3 686 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 INSIG1O15503 277 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ANXA5P08758 320 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 DGKAP23743 735 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 CASP3P42574 277 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 MASP1P48740 699 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 HNRNPFP52597 415 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ACSM2AQ08AH3 577 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ACSM2BQ68CK6 577 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF517Q6ZMY9 492 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 EIF3MQ7L2H7 374 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 GPR142Q7Z601 462 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 PHOX2BQ99453 314 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 BRINP2Q9C0B6 783 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 DCAF13Q9NV06 445 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 TOR4AQ9NXH8 423 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 DKK3Q9UBP4 350 aa13.52□□□□□ -0.25
UBE2D3-210ENST00000453744 ANKRD31Q8N7Z5 1873 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 NRXN2Q9P2S2 1712 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 SLC11A2P49281 568 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 CYP4F8P98187 520 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 NPRL3Q12980 569 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 UAP1L1Q3KQV9 507 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 IRAK1BP1Q5VVH5 260 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 GLB1LQ6UWU2 654 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TMPRSS11AQ6ZMR5 421 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PLEKHH3Q7Z736 793 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PARP16Q8N5Y8 322 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 ZNF675Q8TD23 568 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TMEM203Q969S6 136 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PCDHGB6Q9Y5F9 930 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PPP2R3BQ9Y5P8 575 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MROH6A6NGR9 719 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 E2F3O00716 465 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 ERN1O75460 977 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PRAMEF1O95521 474 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 DAPP51397 102 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MVKQ03426 396 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 ST3GAL4Q11206 333 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MRPL28Q13084 256 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PARP15Q460N3 678 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 RAB41Q5JT25 222 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 ATXN7L2Q5T6C5 722 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PPP2R2DQ66LE6 453 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PTCHD4Q6ZW05 846 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 VASH1Q7L8A9 365 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MED8Q96G25 268 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 GFM1Q96RP9 751 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MTERF1Q99551 399 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TAS2R16Q9NYV7 291 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 GPRC5BQ9NZH0 403 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MYO10Q9HD67 2058 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 ANKRD34BA5PLL1 514 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 KPNA5O15131 536 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TACR2P21452 398 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MZF1P28698 734 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 EIF2DP41214 584 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 RAB25P57735 213 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 GANABQ14697 944 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 MAD2L1BPQ15013 274 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PYDC2Q56P42 97 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 DGKKQ5KSL6 1271 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 DYNC2LI1Q8TCX1 351 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PHF21AQ96BD5 680 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 PCDHB5Q9Y5E4 795 aa13.51□□□□□ -0.25
UBE2D3-210ENST00000453744 TTC34A8MYJ7 566 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 HHLA1C9JL84 531 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 DNAJB5O75953 348 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 CPT1AP50416 773 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 IRF8Q02556 426 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 SERINC3Q13530 473 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 NFE2Q16621 373 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 FAM171A1Q5VUB5 890 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 RNF219Q5W0B1 726 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 MFSD4AQ8N468 514 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 SUN5Q8TC36 379 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 PHF10Q8WUB8 498 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 VNN3Q9NY84 501 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 ZFP37Q9Y6Q3 630 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 SYNDIG1LA6NDD5 238 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 KIAA0513O60268 411 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 CLDN9O95484 217 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 TSPAN19P0C672 248 aa13.5□□□□□ -0.25
UBE2D3-210ENST00000453744 MAPK1P28482 360 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms