RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 DNALI1O14645 258 aaPredicted RBP18.6■□□□□ 0.57
USP40-207ENST00000450940 SRPX2O60687 465 aaPredicted RBP18.6■□□□□ 0.57
USP40-207ENST00000450940 CTSVO60911 334 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 PSMB5P28074 263 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 SLC1A2P43004 574 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 CHAF1BQ13112 559 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 TTLL9Q3SXZ7 439 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.6■□□□□ 0.57
USP40-207ENST00000450940 MLIPQ5VWP3 458 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 MED25Q71SY5 747 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 PCGF5Q86SE9 256 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 TMEM102Q8N9M5 508 aaPredicted RBP18.6■□□□□ 0.57
USP40-207ENST00000450940 GIMAP7Q8NHV1 300 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 IP6K3Q96PC2 410 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 ACSS2Q9NR19 701 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 FAM114A2Q9NRY5 505 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 SLC22A11Q9NSA0 550 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 DHRS7Q9Y394 339 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 FLNCQ14315 2725 aa18.6■□□□□ 0.57
USP40-207ENST00000450940 USP27XA6NNY8 438 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 GFYI3L273 518 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 CNOT3O75175 753 aaKnown RBP18.59■□□□□ 0.57
USP40-207ENST00000450940 CATP04040 527 aaKnown RBP18.59■□□□□ 0.57
USP40-207ENST00000450940 MPC1LP0DKB6 136 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 PGAM1P18669 254 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 ITGAXP20702 1163 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 HSD17B2P37059 387 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 CCL11P51671 97 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 FASTKQ14296 549 aaKnown RBP18.59■□□□□ 0.57
USP40-207ENST00000450940 GRM7Q14831 915 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 CYHR1Q6ZMK1 362 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 RAB43Q86YS6 212 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.59■□□□□ 0.57
USP40-207ENST00000450940 OR2Y1Q8NGV0 311 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 ASB11Q8WXH4 323 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 INPP5DQ92835 1189 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 MIPEPQ99797 713 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 FAM167BQ9BTA0 163 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 SLC25A23Q9BV35 468 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 IFT80Q9P2H3 777 aaPredicted RBP18.59■□□□□ 0.57
USP40-207ENST00000450940 GPN3Q9UHW5 284 aaPredicted RBP18.59■□□□□ 0.57
USP40-207ENST00000450940 PCDHGB7Q9Y5F8 929 aa18.59■□□□□ 0.57
USP40-207ENST00000450940 NUP210LQ5VU65 1888 aa18.58■□□□□ 0.57
USP40-207ENST00000450940 MDC1Q14676 2089 aaKnown RBP18.58■□□□□ 0.57
USP40-207ENST00000450940 NBASA2RRP1 2371 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 A0A1B0GX78 115 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 OR2A25A4D2G3 310 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 EIF3FO00303 357 aaPredicted RBP18.58■□□□□ 0.56
USP40-207ENST00000450940 DSCR3O14972 297 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 HAUS5O94927 633 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 TTC4O95801 387 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 F7P08709 466 aaPredicted RBP18.58■□□□□ 0.56
USP40-207ENST00000450940 ENO3P13929 434 aaPredicted RBP18.58■□□□□ 0.56
USP40-207ENST00000450940 RRADP55042 308 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 FOXK1P85037 733 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 NAA25Q14CX7 972 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 HSP90AA5PQ58FG0 334 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 RNF44Q7L0R7 432 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 CREG2Q8IUH2 290 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 TEX19Q8NA77 164 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 SMPDL3AQ92484 453 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 FKBP10Q96AY3 582 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 PTERQ96BW5 349 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 EBNA1BP2Q99848 306 aaKnown RBP18.58■□□□□ 0.56
USP40-207ENST00000450940 SELENOSQ9BQE4 189 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 NAT9Q9BTE0 207 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 CCDC68Q9H2F9 335 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 IRAK4Q9NWZ3 460 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 NDOR1Q9UHB4 597 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 ASIC3Q9UHC3 531 aa18.58■□□□□ 0.56
USP40-207ENST00000450940 PTRH2Q9Y3E5 179 aaKnown RBP18.58■□□□□ 0.56
USP40-207ENST00000450940 ALBP02768 609 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 FOLR3P41439 243 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 SKIV2L2P42285 1042 aaKnown RBP18.57■□□□□ 0.56
USP40-207ENST00000450940 PGDP52209 483 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 MPP1Q00013 466 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 ATP1A4Q13733 1029 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 CRYMQ14894 314 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 FAM214AQ32MH5 1076 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 MSS51Q4VC12 460 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 FBXO42Q6P3S6 717 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 TTLL10Q6ZVT0 673 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 SYDE1Q6ZW31 735 aaPredicted RBP18.57■□□□□ 0.56
USP40-207ENST00000450940 OVCH1Q7RTY7 1134 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 MRGPREQ86SM8 312 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 KCNMB4Q86W47 210 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 C2CD4AQ8NCU7 369 aaPredicted RBP18.57■□□□□ 0.56
USP40-207ENST00000450940 CD200R1Q8TD46 325 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 NACC2Q96BF6 587 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 PKP4Q99569 1192 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 GPR21Q99679 349 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 AARSD1Q9BTE6 412 aaKnown RBP18.57■□□□□ 0.56
USP40-207ENST00000450940 SLC26A1Q9H2B4 701 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 WDR54Q9H977 334 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 CUTCQ9NTM9 273 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 ANKMY1Q9P2S6 941 aa18.57■□□□□ 0.56
USP40-207ENST00000450940 TSR3Q9UJK0 312 aaKnown RBP18.57■□□□□ 0.56
USP40-207ENST00000450940 ZNF839A8K0R7 811 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 UMODP07911 640 aa18.56■□□□□ 0.56
USP40-207ENST00000450940 PIM1P11309 404 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms