RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 P3H2Q8IVL5 708 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 BBS7Q8IWZ6 715 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CHPFQ8IZ52 775 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 DPP10Q8N608 796 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 FANK1Q8TC84 345 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 APH1BQ8WW43 257 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 UFD1Q92890 307 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 PTP4A1Q93096 173 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MYDGFQ969H8 173 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 CIDECQ96AQ7 238 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 TEKT5Q96M29 485 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ZNF583Q96ND8 569 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 SECISBP2Q96T21 854 aaKnown RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 GABARAPL1Q9H0R8 117 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 TMEM245Q9H330 911 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MIOSQ9NXC5 875 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 TSPAN16Q9UKR8 245 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 RIMKLBQ9ULI2 386 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 MRPS7Q9Y2R9 242 aaKnown RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 KLF2Q9Y5W3 355 aaPredicted RBP8.41□□□□□ -1.06
LSM5-208ENST00000450169 ACTL7AQ9Y615 435 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 ADAMTSL1Q8N6G6 1762 aa8.41□□□□□ -1.06
LSM5-208ENST00000450169 BPTFQ12830 3046 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 RPS10-NUDT3A0A1W2PQS6 291 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ACKR2O00590 384 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ZBTB24O43167 697 aaPredicted RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 VPS26AO75436 327 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 CSF3P09919 207 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 HSMCR30P0CW71 290 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 EPHA2P29317 976 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 NOS2P35228 1153 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 KCNC1P48547 511 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 DAPP51397 102 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 JAG1P78504 1218 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 KYAT1Q16773 422 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 TIMM50Q3ZCQ8 353 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 MTERF2Q49AM1 385 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 FLYWCH1Q4VC44 716 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 CLLU1Q5K131 121 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 KDM4DQ6B0I6 523 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 GPR139Q6DWJ6 353 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ANKRD54Q6NXT1 300 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 KRT73Q86Y46 540 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 TP53INP2Q8IXH6 220 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ZNF548Q8NEK5 533 aaPredicted RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 MASTLQ96GX5 879 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 TBATAQ96M53 351 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 WDFY2Q96P53 400 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 BARD1Q99728 777 aaKnown RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 WACQ9BTA9 647 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ZNF416Q9BWM5 594 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 MRPL4Q9BYD3 311 aaKnown RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 BRINP2Q9C0B6 783 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 MAGIXQ9H6Y5 334 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 OLA1Q9NTK5 396 aaKnown RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 VNN3Q9NY84 501 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 RCOR3Q9P2K3 495 aaPredicted RBP8.4□□□□□ -1.06
LSM5-208ENST00000450169 SRRDQ9UH36 339 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 ENOPH1Q9UHY7 261 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 OGDHLQ9ULD0 1010 aa8.4□□□□□ -1.06
LSM5-208ENST00000450169 SLC35F4A4IF30 521 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 MUSKO15146 869 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 SEC14L5O43304 696 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 OR5F1O95221 314 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 TSPAN12O95859 305 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 RAF1P04049 648 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 HMGN1P05114 100 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ITGB1P05556 798 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 CDK1P06493 297 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 TPOP07202 933 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PFKMP08237 780 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 MMP10P09238 476 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 HOXC6P09630 235 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 MYCLP12524 364 aaPredicted RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 PTX3P26022 381 aaPredicted RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 KCNQ1P51787 676 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 RAB25P57735 213 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PSPHP78330 225 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 NFKB2Q00653 900 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PRKG2Q13237 762 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 VEPH1Q14D04 833 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 SURF1Q15526 300 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 GRIK4Q16099 956 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 TOR1AIP1Q5JTV8 583 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PDZK1Q5T2W1 519 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 APOBEC3HQ6NTF7 200 aaKnown RBP8.4□□□□□ -1.07
LSM5-208ENST00000450169 SWSAP1Q6NVH7 229 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 PKN3Q6P5Z2 889 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 LCLAT1Q6UWP7 414 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 FAM131AQ6UXB0 335 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 MAMSTRQ6ZN01 415 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ZFAND4Q86XD8 727 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 RASGRP3Q8IV61 690 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ENTHD1Q8IYW4 607 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 ZNF687Q8N1G0 1237 aa8.4□□□□□ -1.07
LSM5-208ENST00000450169 NLGN1Q8N2Q7 840 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms