RNA–Protein interactions for RNA: ENST00000448301.6

CTSS-202, Transcript of cathepsin S, humanhuman

TSL 2 BASIC

Gene CTSS, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-202ENST00000448301 TMPRSS7Q7RTY8 843 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 ARHGAP22Q7Z5H3 698 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 KLHDC8AQ8IYD2 350 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 TMEM151AQ8N4L1 468 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 BANPQ8N9N5 519 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 OR2A1Q8NGT9 310 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 ALKBH8Q96BT7 664 aaKnown RBP13.55□□□□□ -0.24
CTSS-202ENST00000448301 PKNOX2Q96KN3 472 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 CCDC74BQ96LY2 380 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 SMC6Q96SB8 1091 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 MAP3K3Q99759 626 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 SGPP1Q9BX95 441 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 PCBD2Q9H0N5 130 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 ATG10Q9H0Y0 220 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 STMN4Q9H169 189 aaPredicted RBP13.55□□□□□ -0.24
CTSS-202ENST00000448301 CENPHQ9H3R5 247 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 TMBIM4Q9HC24 238 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 C1GALT1Q9NS00 363 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 KLHL3Q9UH77 587 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 GRID1Q9ULK0 1009 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 PCDHB11Q9Y5F2 797 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 ACTL7BQ9Y614 415 aa13.55□□□□□ -0.24
CTSS-202ENST00000448301 A0A0J9YY10 115 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 MAP2K7O14733 419 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 TAPBPO15533 448 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 RASSF9O75901 435 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 SBK3P0C264 359 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 CDH3P22223 829 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 MPSTP25325 297 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 PSMB5P28074 263 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 SLC6A12P48065 614 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 CCDC153Q494R4 210 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 SNAP47Q5SQN1 464 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 PHF19Q5T6S3 580 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 N4BP2L1Q5TBK1 243 aaPredicted RBP13.54□□□□□ -0.24
CTSS-202ENST00000448301 CACHD1Q5VU97 1274 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 PRAMEF13Q5VWM6 474 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 C16orf46Q6P387 395 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 LCTLQ6UWM7 567 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 UBTD2Q8WUN7 234 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 MED8Q96G25 268 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 TMEM79Q9BSE2 394 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 ZNF768Q9H5H4 540 aaKnown RBP13.54□□□□□ -0.24
CTSS-202ENST00000448301 CNOT10Q9H9A5 744 aaKnown RBP13.54□□□□□ -0.24
CTSS-202ENST00000448301 SSU72Q9NP77 194 aaKnown RBP13.54□□□□□ -0.24
CTSS-202ENST00000448301 WWOXQ9NZC7 414 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 TAC3Q9UHF0 121 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 PTBP2Q9UKA9 531 aaKnown RBP13.54□□□□□ -0.24
CTSS-202ENST00000448301 HEATR5BQ9P2D3 2071 aa13.54□□□□□ -0.24
CTSS-202ENST00000448301 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 KIF1CO43896 1103 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 SMIM24O75264 130 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 GFAPP14136 432 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 JUPP14923 745 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 LSSP48449 732 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 ALDH18A1P54886 795 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 ABATP80404 500 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 TSTA3Q13630 321 aaPredicted RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 SF1Q15637 639 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 PTCHD3Q3KNS1 767 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 THEMIS2Q5TEJ8 643 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 ICE2Q659A1 982 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 EXOC3L1Q86VI1 746 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 FBXO39Q8N4B4 442 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 CHCHD4Q8N4Q1 142 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 OR2L3Q8NG85 312 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 KLHL6Q8WZ60 621 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 ZBTB9Q96C00 473 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 PYCR2Q96C36 320 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 LIN37Q96GY3 246 aaPredicted RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 MIPEPQ99797 713 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 IQCGQ9H095 443 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
CTSS-202ENST00000448301 EMCNQ9ULC0 261 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 KLK4Q9Y5K2 254 aa13.53□□□□□ -0.24
CTSS-202ENST00000448301 IGHV5-51A0A0C4DH38 117 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 A8MU76 341 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 TYROBPO43914 113 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 PLIN3O60664 434 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 ZBTB11O95625 1053 aaPredicted RBP13.52□□□□□ -0.25
CTSS-202ENST00000448301 PROCP04070 461 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 CREB1P16220 341 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 TAC1P20366 129 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 CMPK1P30085 196 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 NFKB2Q00653 900 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 PRDX1Q06830 199 aaKnown RBP13.52□□□□□ -0.25
CTSS-202ENST00000448301 NAA25Q14CX7 972 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
CTSS-202ENST00000448301 C18orf21Q32NC0 220 aaPredicted RBP13.52□□□□□ -0.25
CTSS-202ENST00000448301 AGBL2Q5U5Z8 902 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms