RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 CDC23Q9UJX2 597 aa15.63■□□□□ 0.09
CTDSP1-204ENST00000443891 SOX13Q9UN79 622 aa15.63■□□□□ 0.09
CTDSP1-204ENST00000443891 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 MAGEB16A2A368 324 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 VSTM2BA6NLU5 285 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 PCDH17O14917 1159 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 VAPBO95292 243 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 ERGP11308 486 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 ITGA3P26006 1051 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 NMBRP28336 390 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 CMPK1P30085 196 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 EIF3BP55884 814 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 RELAQ04206 551 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 RAPSNQ13702 412 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 SLC9A5Q14940 896 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 MUM1Q2TAK8 710 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 ANKRD20A4Q4UJ75 823 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 C4orf17Q53FE4 359 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 CRB2Q5IJ48 1285 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 AGAP7PQ5VUJ5 663 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 KIAA0930Q6ICG6 404 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 RNF44Q7L0R7 432 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 PRUNE1Q86TP1 453 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 FAM20CQ8IXL6 584 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 OR2L3Q8NG85 312 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 OR2A1Q8NGT9 310 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 LPGAT1Q92604 370 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 MVB12AQ96EY5 273 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 AGAP4Q96P64 663 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 WDR77Q9BQA1 342 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 FAM114A2Q9NRY5 505 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 AGPAT4Q9NRZ5 378 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 PLEKHB1Q9UF11 243 aaPredicted RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 KLHL20Q9Y2M5 609 aa15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 SPENQ96T58 3664 aaKnown RBP15.62■□□□□ 0.09
CTDSP1-204ENST00000443891 SOCS6O14544 535 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 PRPF4O43172 522 aaKnown RBP eCLIP15.61■□□□□ 0.096e-7■■■□□ 18.4
CTDSP1-204ENST00000443891 CBX6O95503 412 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 FGGP02679 453 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 CCDC175P0C221 793 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 ARNTP27540 789 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 MAGEA6P43360 314 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 OCA2Q04671 838 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 TUBB8Q3ZCM7 444 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 CTSL3PQ5NE16 218 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 WASHC2DQ5SRD0 308 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 NEK10Q6ZWH5 1172 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 COX15Q7KZN9 410 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 C2orf73Q8N5S3 287 aaPredicted RBP15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 OTUD6BQ8N6M0 293 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 OR9A1PQ8NGU1 263 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 MFSD3Q96ES6 412 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 ZFYVE21Q9BQ24 234 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 LHPPQ9H008 270 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 ZNF304Q9HCX3 659 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 SLC6A20Q9NP91 592 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 INTS10Q9NVR2 710 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 MAP10Q9P2G4 905 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 FBXL4Q9UKA2 621 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 CDC14AQ9UNH5 594 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 PCDHGA10Q9Y5H3 936 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 HS3ST3B1Q9Y662 390 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 COPG1Q9Y678 874 aaKnown RBP15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 NFS1Q9Y697 457 aa15.61■□□□□ 0.09
CTDSP1-204ENST00000443891 SHANK1Q9Y566 2161 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 FER1L5A0AVI2 2057 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 IGLV3-12A0A075B6K2 115 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 A0A1W2PPV9 198 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 HYKKA2RU49 373 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 OR2A25A4D2G3 310 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 WIPF3A6NGB9 483 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 TXNDC9O14530 226 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 CTSVO60911 334 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 SEMA7AO75326 666 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 VPS26AO75436 327 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 CCNDBP1O95273 360 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 MLNP12872 115 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 CHRM3P20309 590 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 MGAT1P26572 445 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 VSX2P58304 361 aaPredicted RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 CRADDP78560 199 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 ELOAQ14241 798 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 ESPL1Q14674 2120 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 RBBP7Q16576 425 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 EIF2S3LQ2VIR3 472 aaKnown RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 PRR30Q53SZ7 412 aaPredicted RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 B3GNTL1Q67FW5 361 aaPredicted RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 KIRREL2Q6UWL6 708 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 LMNTD2Q8IXW0 634 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 FBXO15Q8NCQ5 510 aaPredicted RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 SMPDL3AQ92484 453 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 MIPEPQ99797 713 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 EPS8L2Q9H6S3 715 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 ASF1BQ9NVP2 202 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 SYBUQ9NX95 663 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 LUZP4Q9P127 313 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 ZNF282Q9UDV7 671 aaPredicted RBP15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 PCSK5Q92824 1860 aa15.6■□□□□ 0.09
CTDSP1-204ENST00000443891 SPTAN1Q13813 2472 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms