RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CHMP2BQ9UQN3 213 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 PCDHGA6Q9Y5G7 932 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.05
USP6NL-203ENST00000443016 SLC5A10A0PJK1 596 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 IQCF5A8MTL0 148 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 E7EQ34 232 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 MEN1O00255 615 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 CD3EAPO15446 510 aaKnown RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 SUV39H1O43463 412 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 NDUFS3O75489 264 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 TTC4O95801 387 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 GSTA2P09210 222 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 H2AFXP16104 143 aaPredicted RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PGAM1P18669 254 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PAMP19021 973 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PTPN4P29074 926 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 CCR7P32248 378 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 EIF1AXP47813 144 aaKnown RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PRSS12P56730 875 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 RPS18P62269 152 aaKnown RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 KCNC4Q03721 635 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 ACVR1Q04771 509 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 GPS2Q13227 327 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 TMED2Q15363 201 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 TTC23LQ6PF05 361 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PALM2Q8IXS6 379 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 SLC38A9Q8NBW4 561 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 FBXO36Q8NEA4 188 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 GABPB2Q8TAK5 448 aaPredicted RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 UBLCP1Q8WVY7 318 aaPredicted RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 TRAPPC9Q96Q05 1148 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PITPNM3Q9BZ71 974 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 ACTR5Q9H9F9 607 aaPredicted RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 ZC3H7BQ9UGR2 993 aaKnown RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 ICKQ9UPZ9 632 aa8.46□□□□□ -1.06
USP6NL-203ENST00000443016 FARSAQ9Y285 508 aaKnown RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 UBR5O95071 2799 aaPredicted RBP8.46□□□□□ -1.06
USP6NL-203ENST00000443016 PFDN6O15212 129 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 AGR2O95994 175 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CHRM5P08912 532 aaPredicted RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 FURINP09958 794 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 FAM153BP0C7A2 387 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ACADLP28330 430 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ELK3P41970 407 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ITGA1P56199 1179 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ABRQ12979 859 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SEMA3AQ14563 771 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 FAM153CQ494X1 144 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 OTOAQ7RTW8 1153 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SDCCAG8Q86SQ7 713 aaPredicted RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 TMEM135Q86UB9 458 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 TRIM73Q86UV7 250 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 MREGQ8N565 214 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 OR1L3Q8NH93 324 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 TCTN2Q96GX1 697 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 PANX3Q96QZ0 392 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 RUFY1Q96T51 708 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 MYCBPQ99417 103 aaPredicted RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 EBNA1BP2Q99848 306 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF700Q9H0M5 742 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CHST8Q9H2A9 424 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CDC42EP4Q9H3Q1 356 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 MRM3Q9HC36 420 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SYBUQ9NX95 663 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SNX7Q9UNH6 387 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 AVILO75366 819 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 RFPL1O75677 317 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 OR2B3O76000 313 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 VAPBO95292 243 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 WISP1O95388 367 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 UGT2B7P16662 529 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 AGXTP21549 392 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 STX2P32856 288 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 EIF3BP55884 814 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 LACTB2Q53H82 288 aaPredicted RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 ALKBH2Q6NS38 261 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 MRNIPQ6NTE8 343 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 LHFPL2Q6ZUX7 228 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SYVN1Q86TM6 617 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SYTL1Q8IYJ3 562 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 KRT222Q8N1A0 295 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 C19orf47Q8N9M1 422 aaKnown RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CFAP36Q96G28 342 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 PWWP2AQ96N64 755 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 OCSTAMPQ9BR26 566 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CLMPQ9H6B4 373 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 LATS2Q9NRM7 1088 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SPHK1Q9NYA1 384 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 MARCH4Q9P2E8 410 aaPredicted RBP8.45□□□□□ -1.06
USP6NL-203ENST00000443016 CIDEBQ9UHD4 219 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 GNPTGQ9UJJ9 305 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SLC39A10Q9ULF5 831 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 SOX13Q9UN79 622 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 PCDHGB3Q9Y5G1 929 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 TEX264Q9Y6I9 313 aa8.45□□□□□ -1.06
USP6NL-203ENST00000443016 FAM237BA0A1B0GVD1 139 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 C9J4A7 227 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 GOLGA8KD6RF30 607 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms