RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 DDX39BQ13838 428 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 DOC2AQ14183 400 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 MLF2Q15773 248 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 TIGD2Q4W5G0 525 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC44A4Q53GD3 710 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SPIN4Q56A73 249 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PIGGQ5H8A4 983 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 TCHHL1Q5QJ38 904 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 TMPRSS11BQ86T26 416 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 FAM124AQ86V42 546 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HPS6Q86YV9 775 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SYT12Q8IV01 421 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS50-205ENST00000441602 LIX1Q8N485 282 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 VPS37AQ8NEZ2 397 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 RPLP0P6Q8NHW5 317 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 KLK6Q92876 244 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 OR52A5Q9H2C5 316 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 S100A14Q9HCY8 104 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 VPS29Q9UBQ0 182 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 GIMAP2Q9UG22 337 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 DMTF1Q9Y222 760 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 COLEC10Q9Y6Z7 277 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TMEM202A6NGA9 273 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC31A1O15431 190 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC16A8O95907 504 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PDHA2P29803 388 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 CLCNKAP51800 687 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC7A2P52569 658 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SESN3P58005 492 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 UFM1P61960 85 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NFATC4Q14934 902 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 VPS26BQ4G0F5 336 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 METRNLQ641Q3 311 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ATG9BQ674R7 924 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 KIAA1211LQ6NV74 962 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 GOLM1Q8NBJ4 401 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 OR9I1Q8NGQ6 314 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 OR2T11Q8NH01 316 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ZNF480Q8WV37 535 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 WDR60Q8WVS4 1066 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ASB9Q96DX5 294 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ITCHQ96J02 903 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 C12orf66Q96MD2 445 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NELL2Q99435 816 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SGPP1Q9BX95 441 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ZDHHC5Q9C0B5 715 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 NDRG2Q9UN36 371 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 ZFR2Q9UPR6 939 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 DENND4AQ7Z401 1863 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 KCNE1BA0A087WTH5 132 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TNFRSF10CO14798 259 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NVLO15381 856 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 BCAS2O75934 225 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 G6PDP11413 515 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ANPEPP15144 967 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HOXB6P17509 224 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 COL9A1P20849 921 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PRPS1L1P21108 318 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ACADLP28330 430 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 GCKP35557 465 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 GRK3P35626 688 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 IGFALSP35858 605 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 CCR5P51681 352 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 CLDN8P56748 225 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HMGCS1Q01581 520 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SRSF11Q05519 484 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 PWP1Q13610 501 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ADGRE1Q14246 886 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TRIM25Q14258 630 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLBPQ14493 270 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS50-205ENST00000441602 MAPKAPK3Q16644 382 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 ZNF423Q2M1K9 1284 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 C6orf10Q5SRN2 563 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NXPE4Q6UWF7 544 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 CHST15Q7LFX5 561 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 R3HCC1LQ7Z5L2 792 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 DHFR2Q86XF0 187 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TMEM132CQ8N3T6 1108 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 DPP10Q8N608 796 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HIPK4Q8NE63 616 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 TSTD1Q8NFU3 115 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC13A3Q8WWT9 602 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 SNX19Q92543 992 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 NELL1Q92832 810 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HLA-CQ95604 372 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 LRRC58Q96CX6 371 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 MTFMTQ96DP5 389 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 LRCH3Q96II8 777 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 MKRN2Q9H000 416 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 IL1RL2Q9HB29 575 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 MBNL1Q9NR56 388 aaKnown RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 C6orf203Q9P0P8 240 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 MBD1Q9UIS9 605 aaPredicted RBP5.84□□□□□ -1.47
VPS50-205ENST00000441602 SLC17A4Q9Y2C5 497 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 HS3ST3A1Q9Y663 406 aa5.84□□□□□ -1.47
VPS50-205ENST00000441602 PLXNB3Q9ULL4 1909 aa5.83□□□□□ -1.48
VPS50-205ENST00000441602 A0A1B0GTL3 188 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms