RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 TMEM74Q96NL1 305 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 KANSL1LA0AUZ9 987 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 DHRS12A0PJE2 317 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 MGAT4DA6NG13 374 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 ZNF839A8K0R7 811 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 GPIP06744 558 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CD22P20273 847 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 MED21Q13503 144 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 DOC2AQ14183 400 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 SLC44A4Q53GD3 710 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 SPANXN4Q5MJ08 99 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 PNCKQ6P2M8 343 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 XKR5Q6UX68 686 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 PROSER1Q86XN7 944 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 SPPL2CQ8IUH8 684 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CHPFQ8IZ52 775 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CSGALNACT1Q8TDX6 532 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 CANT1Q8WVQ1 401 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 NECTIN4Q96NY8 510 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 OR4K3Q96R72 315 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 RPP25Q9BUL9 199 aaKnown RBP24.93■■□□□ 1.58
CPNE1-216ENST00000437340 DLGAP4Q9Y2H0 992 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 KCNE2Q9Y6J6 123 aa24.93■■□□□ 1.58
CPNE1-216ENST00000437340 ANTXRLA6NF34 631 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 E7EQ34 232 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 AMD1P17707 334 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 PSMA4P25789 261 aaKnown RBP24.92■■□□□ 1.58
CPNE1-216ENST00000437340 TNFRSF4P43489 277 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 HSPA13P48723 471 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 AGERQ15109 404 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 AGBL4Q5VU57 503 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 KRTCAP2Q8N6L1 136 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 LRTOMTQ8WZ04 291 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 PPM1MQ96MI6 270 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 TRIM8Q9BZR9 551 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 ITM2CQ9NQX7 267 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 AP3M1Q9Y2T2 418 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 PCDHB3Q9Y5E6 796 aa24.92■■□□□ 1.58
CPNE1-216ENST00000437340 H0YJX3 145 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 MID1O15344 667 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 HNRNPRO43390 633 aaKnown RBP24.91■■□□□ 1.58
CPNE1-216ENST00000437340 UMPSP11172 480 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 C5AR1P21730 350 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 IL10P22301 178 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 PNLIPRP1P54315 467 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 CAPN13Q6MZZ7 669 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-216ENST00000437340 IFNEQ86WN2 208 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 AADATQ8N5Z0 425 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 TESCQ96BS2 214 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 APIPQ96GX9 242 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 BRF2Q9HAW0 419 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 SPATA6Q9NWH7 488 aaPredicted RBP24.91■■□□□ 1.58
CPNE1-216ENST00000437340 RAB26Q9ULW5 256 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 TICRRQ7Z2Z1 1910 aa24.91■■□□□ 1.58
CPNE1-216ENST00000437340 SDC1P18827 310 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 TAS2R38P59533 333 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 RPA4Q13156 261 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 UNC5DQ6UXZ4 953 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 TRMT11Q7Z4G4 463 aaKnown RBP24.9■■□□□ 1.58
CPNE1-216ENST00000437340 C11orf96Q7Z7L8 435 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 ZNF513Q8N8E2 541 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-216ENST00000437340 PLA2G15Q8NCC3 412 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 OR9A1PQ8NGU1 263 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 ZNF480Q8WV37 535 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 NUDT8Q8WV74 236 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 SH3GL1Q99961 368 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 Q9H521 79 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 VPS29Q9UBQ0 182 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 MAGEL2Q9UJ55 1249 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 NEUROG3Q9Y4Z2 214 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 PCDHGA11Q9Y5H2 935 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 UNC80Q8N2C7 3258 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 ACADLP28330 430 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 ERMP1Q7Z2K6 904 aa24.9■■□□□ 1.58
CPNE1-216ENST00000437340 IGLON5A6NGN9 336 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 DENRO43583 198 aaKnown RBP24.89■■□□□ 1.57
CPNE1-216ENST00000437340 PRMT3O60678 531 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 TEAD1P28347 426 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 FOLH1Q04609 750 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 CCDC85BQ15834 202 aaPredicted RBP24.89■■□□□ 1.57
CPNE1-216ENST00000437340 C10orf62Q5T681 223 aaPredicted RBP24.89■■□□□ 1.57
CPNE1-216ENST00000437340 NOXRED1Q6NXP6 359 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 MSANTD1Q6ZTZ1 278 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 ADGRG5Q8IZF4 528 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 EME1Q96AY2 570 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 HHIPQ96QV1 700 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 OR52E6Q96RD3 313 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 VAPAQ9P0L0 249 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 SCOCQ9UIL1 159 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 MAN2B2Q9Y2E5 1009 aa24.89■■□□□ 1.57
CPNE1-216ENST00000437340 DNMT3AQ9Y6K1 912 aaPredicted RBP24.89■■□□□ 1.57
CPNE1-216ENST00000437340 TCRBV5S2A0A599 114 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 ERN1O75460 977 aaKnown RBP24.88■■□□□ 1.57
CPNE1-216ENST00000437340 BMP2P12643 396 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 TBCELQ5QJ74 424 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 CRTC3Q6UUV7 619 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-216ENST00000437340 HEATR4Q86WZ0 1026 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 SYTL1Q8IYJ3 562 aa24.88■■□□□ 1.57
CPNE1-216ENST00000437340 ANKFN1Q8N957 763 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms