RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 LACRTQ9GZZ8 138 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 WDR54Q9H977 334 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 CUTCQ9NTM9 273 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 CATSPERZQ9NTU4 200 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 ASF1BQ9NVP2 202 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 PGPEP1Q9NXJ5 209 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 IL1RAPL1Q9NZN1 696 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 CIDEBQ9UHD4 219 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 GNPTGQ9UJJ9 305 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 PACSIN2Q9UNF0 486 aaPredicted RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 R3HDM2Q9Y2K5 976 aaKnown RBP7.45□□□□□ -1.22
VPS50-203ENST00000436177 KLHL20Q9Y2M5 609 aa7.45□□□□□ -1.22
VPS50-203ENST00000436177 AP3B1O00203 1094 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 RASGRF2O14827 1237 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 DSCR3O14972 297 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 PRPF4O43172 522 aaKnown RBP eCLIP7.44□□□□□ -1.22
VPS50-203ENST00000436177 ALBP02768 609 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 UMODP07911 640 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 SPTBP11277 2137 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 ACPPP15309 386 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 CCR7P32248 378 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 CCNFP41002 786 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 CARSP49589 748 aaKnown RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 SESN2P58004 480 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 VSX2P58304 361 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 CDC16Q13042 620 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 KLF1Q13351 362 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 SNX1Q13596 522 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 FAM214AQ32MH5 1076 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 TUBB8Q3ZCM7 444 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 HIST2H2BCQ6DN03 193 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 FIGLAQ6QHK4 219 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 FAM180AQ6UWF9 173 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 IGFL3Q6UXB1 125 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 RAD9BQ6WBX8 426 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 MICALCLQ6ZW33 695 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 GSTA5Q7RTV2 222 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 SDCCAG8Q86SQ7 713 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 LRRC6Q86X45 466 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 FAM20CQ8IXL6 584 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 MPP5Q8N3R9 675 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 DNAJC22Q8N4W6 341 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 OR13J1Q8NGT2 312 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 OR2L8Q8NGY9 312 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 MAGEC3Q8TD91 643 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 PPP4R1Q8TF05 950 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 UBE2Q2Q8WVN8 375 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 PEX13Q92968 403 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 RAD51AP1Q96B01 352 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 C19orf60Q96EN9 201 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 IL17FQ96PD4 163 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 RANBP9Q96S59 729 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 CRB3Q9BUF7 120 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 TSGA10Q9BZW7 698 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 ETNK1Q9HBU6 452 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 SEMA3GQ9NS98 782 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 PAK5Q9P286 719 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 SLC2A6Q9UGQ3 507 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 RIMKLBQ9ULI2 386 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 TTC7AQ9ULT0 858 aaPredicted RBP7.44□□□□□ -1.22
VPS50-203ENST00000436177 TCAF1Q9Y4C2 921 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 CNTRLQ7Z7A1 2325 aa7.44□□□□□ -1.22
VPS50-203ENST00000436177 ITPR2Q14571 2701 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 TCRBV7S2A1N4TA0A589 114 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 ENO4A6NNW6 628 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 MAP2K7O14733 419 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 CD3EAPO15446 510 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 HCRTR1O43613 425 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 LIASO43766 372 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 VPS26AO75436 327 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 USP1O94782 785 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 SUN1O94901 812 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 EIF2S1P05198 315 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 FBLP22087 321 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 CXCR2P25025 360 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 PSMA3P25788 255 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 CMPK1P30085 196 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 PEBP1P30086 187 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 GRIA3P42263 894 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 GABRA4P48169 554 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 EIF3BP55884 814 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 BASP1P80723 227 aaKnown RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 TSTA3Q13630 321 aaPredicted RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 ZNF169Q14929 603 aaPredicted RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 TLR1Q15399 786 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 MUM1Q2TAK8 710 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 PCID2Q5JVF3 399 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 RNF187Q5TA31 235 aaPredicted RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 MRNIPQ6NTE8 343 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 CNSTQ6PJW8 725 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 SHISA6Q6ZSJ9 500 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 LURAP1LQ8IV03 231 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 PRSS58Q8IYP2 241 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 KRT222Q8N1A0 295 aa7.43□□□□□ -1.22
VPS50-203ENST00000436177 METTL27Q8N6F8 245 aaPredicted RBP7.43□□□□□ -1.22
VPS50-203ENST00000436177 LINC01555Q8NAE3 123 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms