RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 FOXJ1Q92949 421 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 CCDC138Q96M89 665 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 ADI1Q9BV57 179 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 PCDHB14Q9Y5E9 798 aa13.55□□□□□ -0.24
HOXC4-202ENST00000430889 EME2A4GXA9 379 aaPredicted RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 OTOL1A6NHN0 477 aaPredicted RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 H0YIV9 168 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 EI24O14681 340 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 H6PDO95479 791 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 PRNPP04156 253 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 RAP2AP10114 183 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 MYOGP15173 224 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 IMPA1P29218 277 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 SOX11P35716 441 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 MAPK9P45984 424 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 SLC6A11P48066 632 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 PREPP48147 710 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 MERTKQ12866 999 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 ABRQ12979 859 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 ACOX1Q15067 660 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 NKG7Q16617 165 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 HNRNPA1L2Q32P51 320 aaKnown RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 GRHL2Q6ISB3 625 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 NOXRED1Q6NXP6 359 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 AGTRAPQ6RW13 159 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 GPR155Q7Z3F1 870 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 GPR149Q86SP6 731 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 C10orf111Q8N326 155 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 OR10A6Q8NH74 314 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 ATL1Q8WXF7 558 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 SMG7Q92540 1137 aaKnown RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 SH3GL1Q99961 368 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 OSBPL6Q9BZF3 934 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.54□□□□□ -0.24
HOXC4-202ENST00000430889 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
HOXC4-202ENST00000430889 PABPN1LA6NDY0 278 aaKnown RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 E7EQ34 232 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CLOCKO15516 846 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 PRMT3O60678 531 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 SCN2BO60939 215 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 OR6B1O95007 311 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 SCELO95171 688 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CATP04040 527 aaKnown RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 GNAO1P09471 354 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 S100A3P33764 101 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HALP42357 657 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 BDKRB1P46663 353 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 WNT3P56703 355 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 DOC2AQ14183 400 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 NADK2Q4G0N4 442 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 FAM78AQ5JUQ0 283 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 BORAQ6PGQ7 559 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 USP51Q70EK9 711 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 NPAS3Q8IXF0 933 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 GALNT15Q8N3T1 639 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 RNF175Q8N4F7 328 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 FAM86B1Q8N7N1 296 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TNIP2Q8NFZ5 429 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CSGALNACT1Q8TDX6 532 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TMEM159Q96B96 161 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ASB16Q96NS5 453 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TSSK3Q96PN8 268 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 PKP4Q99569 1192 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 INPP5KQ9BT40 448 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 PRKAG2Q9UGJ0 569 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 EDDM13A0A1B0GTR0 161 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ELOVL7A1L3X0 281 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 KPNA3O00505 521 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 VILLO15195 856 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 B3GALT4O96024 378 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 MT-ND1P03886 318 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 RETP07949 1114 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HSD3B1P14060 373 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 IL1RNP18510 177 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HSD3B2P26439 372 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 PDHA2P29803 388 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HNF4AP41235 474 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CDKN2CP42773 168 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 IRF8Q02556 426 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 DPTQ07507 201 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 NAE1Q13564 534 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ADRM1Q16186 407 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 KCTD21Q4G0X4 260 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 SYTL3Q4VX76 610 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 CYBRD1Q53TN4 286 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
HOXC4-202ENST00000430889 DNAJC14Q6Y2X3 702 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 ZNF551Q7Z340 670 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 C12orf76Q8N812 135 aaPredicted RBP13.53□□□□□ -0.24
HOXC4-202ENST00000430889 HM13Q8TCT9 377 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms