RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 UGT2B7P16662 529 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 CDH3P22223 829 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 CMPK1P30085 196 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 PEBP1P30086 187 aaKnown RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 GGT5P36269 586 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 HSPA7P48741 367 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 PRKAA2P54646 552 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 CCL7P80098 99 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 ABATP80404 500 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 CDC16Q13042 620 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 SQSTM1Q13501 440 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 FASTKQ14296 549 aaKnown RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 PCBP2Q15366 365 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD4-202ENST00000430771 PDK4Q16654 411 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 RSPO4Q2I0M5 234 aaPredicted RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 PTCHD3Q3KNS1 767 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 CCDC157Q569K6 752 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 NKAIN2Q5VXU1 208 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 TMEM71Q6P5X7 295 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 SUSD1Q6UWL2 747 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 RBM44Q6ZP01 1051 aaKnown RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 PRSS42Q7Z5A4 293 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 LRRC56Q8IYG6 542 aaPredicted RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 ANKRD42Q8N9B4 389 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 OR4D9Q8NGE8 314 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 NCSTNQ92542 709 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 PHF21BQ96EK2 531 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 SGPP1Q9BX95 441 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 ABCF3Q9NUQ8 709 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 DNAJC11Q9NVH1 559 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 GPRC5BQ9NZH0 403 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 SLC17A7Q9P2U7 560 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 PTBP2Q9UKA9 531 aaKnown RBP10.63□□□□□ -0.71
CHD4-202ENST00000430771 ANGPTL3Q9Y5C1 460 aa10.63□□□□□ -0.71
CHD4-202ENST00000430771 A0A1W2PPV9 198 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 G3V2L1 256 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 K7EPI3 171 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TM4SF5O14894 197 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TOX3O15405 576 aaPredicted RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 TAPBPO15533 448 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 MAP3K7O43318 606 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 DLX3O60479 287 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 H2AFYO75367 372 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 KATNA1O75449 491 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 RASSF9O75901 435 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 C9P02748 559 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SBK3P0C264 359 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ANKRD34CP0C6C1 535 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 THRAP10827 490 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 NR1D1P20393 614 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 PSMB5P28074 263 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 CD1CP29017 333 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 EEF1DP29692 281 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 ETV4P43268 484 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 KCNC1P48547 511 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SERPINB4P48594 390 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 GFERP55789 205 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 HERVK_113P63132 956 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 PPP2R2AP63151 447 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SIM1P81133 766 aaPredicted RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 PCLAFQ15004 111 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SF1Q15637 639 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 HHATQ5VTY9 493 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 LIPMQ5VYY2 423 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ICE2Q659A1 982 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ALYREFQ86V81 257 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 THOC6Q86W42 341 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 C17orf64Q86WR6 236 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TMEM151AQ8N4L1 468 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 C2orf73Q8N5S3 287 aaPredicted RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SNX31Q8N9S9 440 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 LMNTD1Q8N9Z9 388 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 OR2L3Q8NG85 312 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 PPP4R1Q8TF05 950 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 PYCR2Q96C36 320 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TGM7Q96PF1 710 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TMEM237Q96Q45 408 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 NUDT22Q9BRQ3 303 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 C1QTNF3Q9BXJ4 246 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ERVK-6Q9BXR3 956 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 CAPS2Q9BXY5 557 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 CD244Q9BZW8 370 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TWSG1Q9GZX9 223 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 MRPS30Q9NP92 439 aaKnown RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 SPHK1Q9NYA1 384 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ANKMY1Q9P2S6 941 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 ATXN7L1Q9ULK2 861 aaPredicted RBP10.62□□□□□ -0.71
CHD4-202ENST00000430771 STK38LQ9Y2H1 464 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 KCNE2Q9Y6J6 123 aa10.62□□□□□ -0.71
CHD4-202ENST00000430771 COL27A1Q8IZC6 1860 aaPredicted RBP10.61□□□□□ -0.71
CHD4-202ENST00000430771 ADAMTS20P59510 1910 aa10.61□□□□□ -0.71
CHD4-202ENST00000430771 SPAARA0A1B0GVQ0 90 aa10.61□□□□□ -0.71
CHD4-202ENST00000430771 TMX2-CTNND1H3BSU7 103 aa10.61□□□□□ -0.71
CHD4-202ENST00000430771 CLGNO14967 610 aa10.61□□□□□ -0.71
CHD4-202ENST00000430771 BIRC5O15392 142 aa10.61□□□□□ -0.71
CHD4-202ENST00000430771 TRIM13O60858 407 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms