RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 VNN3Q9NY84 501 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 IQGAP1P46940 1657 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 FAM172BPA6NC97 362 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 CSN2P05814 226 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 YBEYP58557 167 aaPredicted RBP13.02□□□□□ -0.32
CDK12-201ENST00000430627 TNFAIP8L2Q6P589 184 aaPredicted RBP13.02□□□□□ -0.32
CDK12-201ENST00000430627 FEM1AQ9BSK4 669 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 TAGLN3Q9UI15 199 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 L1RE1Q9UN81 338 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 Q9Y3F1 56 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 MYO3AQ8NEV4 1616 aa13.02□□□□□ -0.32
CDK12-201ENST00000430627 MAP3K8P41279 467 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 ACY1Q03154 408 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 PDK4Q16654 411 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.33
CDK12-201ENST00000430627 TMPRSS11AQ6ZMR5 421 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 RNF157Q96PX1 679 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 TBX5Q99593 518 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 PAPOLGQ9BWT3 736 aaKnown RBP13.02□□□□□ -0.33
CDK12-201ENST00000430627 H3BML4 177 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 TPOP07202 933 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 ICAM3P32942 547 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 OR3A3P47888 321 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 OR3A2P47893 321 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 GRIA4P48058 902 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 KCNQ1P51787 676 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 C22orf39Q6P5X5 142 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 LCTLQ6UWM7 567 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 LINC00696Q6ZRV3 163 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 SLC5A8Q8N695 610 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 TFGQ92734 400 aaPredicted RBP13.02□□□□□ -0.33
CDK12-201ENST00000430627 THRSPQ92748 146 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 CNDP2Q96KP4 475 aaKnown RBP13.02□□□□□ -0.33
CDK12-201ENST00000430627 MAGEB18Q96M61 343 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 IPPKQ9H8X2 491 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 ABCB10Q9NRK6 738 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 DECR2Q9NUI1 292 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 UTS2RQ9UKP6 389 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 VWA7Q9Y334 891 aa13.02□□□□□ -0.33
CDK12-201ENST00000430627 MID1O15344 667 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ATE1O95260 518 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 CCNHP51946 323 aaPredicted RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 AIF1P55008 147 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 SWI5Q1ZZU3 235 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 HMBOX1Q6NT76 420 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 NUDT13Q86X67 352 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 SFXN2Q96NB2 322 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 M0R2N6 131 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 HCRTR2O43614 444 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 GLI1P08151 1106 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ECHS1P30084 290 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 FMO1Q01740 532 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 TNK2Q07912 1038 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 NEDD8Q15843 81 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 OR52J3Q8NH60 311 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ARRDC1-AS1Q9H2J1 176 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ZNF222Q9UK12 451 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 PGRMC2O15173 223 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 GABBR2O75899 941 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 PAHP00439 452 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 PPIBP23284 216 aaKnown RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 CST6Q15828 149 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 LRIG3Q6UXM1 1119 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 KATNAL2Q8IYT4 538 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 CLSTN3Q9BQT9 956 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 CDC42EP4Q9H3Q1 356 aaKnown RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 EIF3HO15372 352 aaKnown RBP eCLIP13.01□□□□□ -0.333e-7■■■□□ 17.7
CDK12-201ENST00000430627 GKP32189 559 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 TRAF3Q13114 568 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ATP1A4Q13733 1029 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 TP53INP2Q8IXH6 220 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 OR10H4Q8NGA5 316 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 RORBQ92753 470 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 VRK1Q99986 396 aaPredicted RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 EHD3Q9NZN3 535 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 DNAJB11Q9UBS4 358 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 KCNA3P22001 575 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 APLNRP35414 380 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 CLCA4Q14CN2 919 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 FLYWCH1Q4VC44 716 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 ZNF648Q5T619 568 aaPredicted RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 ARPINQ7Z6K5 226 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 THEM6Q8WUY1 208 aa13.01□□□□□ -0.33
CDK12-201ENST00000430627 MTERF1Q99551 399 aaKnown RBP13.01□□□□□ -0.33
CDK12-201ENST00000430627 RPP14O95059 124 aaKnown RBP13□□□□□ -0.33
CDK12-201ENST00000430627 CSNK2A2P19784 350 aaPredicted RBP13□□□□□ -0.33
CDK12-201ENST00000430627 TNFRSF4P43489 277 aa13□□□□□ -0.33
CDK12-201ENST00000430627 BPIFB6Q8NFQ5 453 aa13□□□□□ -0.33
CDK12-201ENST00000430627 SLC38A4Q969I6 547 aa13□□□□□ -0.33
CDK12-201ENST00000430627 SUSD3Q96L08 255 aa13□□□□□ -0.33
CDK12-201ENST00000430627 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
CDK12-201ENST00000430627 DGCR6LQ9BY27 220 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms