RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 KIAA1614Q5VZ46 1190 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 SBSNQ6UWP8 590 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 RASGRP3Q8IV61 690 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 LSMEM2Q8N112 164 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 STAG3L4Q8TBR4 150 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 ATL1Q8WXF7 558 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 ANKRD7Q92527 254 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 PTERQ96BW5 349 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 NAF1Q96HR8 494 aaKnown RBP14.04□□□□□ -0.16
SGCE-204ENST00000428696 UBXN10Q96LJ8 280 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 SLC46A1Q96NT5 459 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 TAAR9Q96RI9 348 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 DHRS4Q9BTZ2 278 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 CCDC177Q9NQR7 707 aaPredicted RBP14.04□□□□□ -0.16
SGCE-204ENST00000428696 IGSF5Q9NSI5 407 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 PCMTD2Q9NV79 361 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
SGCE-204ENST00000428696 OARD1Q9Y530 152 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 PTPRBP23467 1997 aa14.04□□□□□ -0.16
SGCE-204ENST00000428696 ERLIN1O75477 346 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 ANKRD34CP0C6C1 535 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 TBPL1P62380 186 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 YBX1P67809 324 aaKnown RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 MC2RQ01718 297 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 RTP5Q14D33 572 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 C18orf21Q32NC0 220 aaPredicted RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 FBXO48Q5FWF7 155 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 CAPN13Q6MZZ7 669 aaPredicted RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 FIGLAQ6QHK4 219 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 CCDC91Q7Z6B0 441 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 KMT5CQ86Y97 462 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 C19orf47Q8N9M1 422 aaKnown RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 OR2L3Q8NG85 312 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 OR2A1Q8NGT9 310 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 KIAA1191Q96A73 305 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 TCTN2Q96GX1 697 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 SLC41A2Q96JW4 573 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 FANCEQ9HB96 536 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 MRPS30Q9NP92 439 aaKnown RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 FGF21Q9NSA1 209 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 ZNF358Q9NW07 568 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 WWOXQ9NZC7 414 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
SGCE-204ENST00000428696 PLAAQ9Y263 795 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 PCDHGA8Q9Y5G5 932 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 AKAP13Q12802 2813 aa14.03□□□□□ -0.16
SGCE-204ENST00000428696 A0A1W2PPV9 198 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 B4E171 279 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 KLHL2O95198 593 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 CCNDBP1O95273 360 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.16
SGCE-204ENST00000428696 PYGBP11216 843 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 SLC5A2P31639 672 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 SLC26A3P40879 764 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 TSPAN7P41732 249 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 ACY1Q03154 408 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 TGFBIQ15582 683 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 DEFB110Q30KQ9 67 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 PRAMEF13Q5VWM6 474 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 ICE2Q659A1 982 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 UNQ6494/PRO21346Q6UXR6 183 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 ISCA2Q86U28 154 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 CENPLQ8N0S6 344 aaPredicted RBP14.02□□□□□ -0.16
SGCE-204ENST00000428696 PLD6Q8N2A8 252 aaKnown RBP14.02□□□□□ -0.16
SGCE-204ENST00000428696 FLVCR1-AS1Q8TAF5 88 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 HMGCLL1Q8TB92 370 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 PMEPA1Q969W9 287 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 FBXL8Q96CD0 374 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 DPH7Q9BTV6 452 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 ASPSCR1Q9BZE9 553 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 SLC7A5P2Q9GIP4 190 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 CENPHQ9H3R5 247 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 FAM60AQ9NP50 221 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 THSD1Q9NS62 852 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 FETUBQ9UGM5 382 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 SERTAD3Q9UJW9 196 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 RARRES3Q9UL19 164 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 B3GALT1Q9Y5Z6 326 aa14.02□□□□□ -0.16
SGCE-204ENST00000428696 A0A1W2PPM1 405 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 TMEM150CB9EJG8 249 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 UBXN8O00124 270 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 PRICKLE3O43900 615 aaPredicted RBP14.01□□□□□ -0.17
SGCE-204ENST00000428696 GFAPP14136 432 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 GDF5P43026 501 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 KCNC1P48547 511 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 ACAP2Q15057 778 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 ZIC1Q15915 447 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 PPP1R3AQ16821 1122 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 CEACAM20Q6UY09 585 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 CDHR3Q6ZTQ4 885 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 PPP1R3BQ86XI6 285 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 CYP4X1Q8N118 509 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 CARFQ8N187 725 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 D2HGDHQ8N465 521 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 GATA6Q92908 595 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 ESAMQ96AP7 390 aa14.01□□□□□ -0.17
SGCE-204ENST00000428696 FBXO8Q9NRD0 319 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms