RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 GLB1L3Q8NCI6 653 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 OR13C4Q8NGS5 318 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF431Q8TF32 576 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ISOC1Q96CN7 298 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF347Q96SE7 839 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CDRT1O95170 752 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 AOC1P19801 751 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 SCARB2Q14108 478 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ANKDD1AQ495B1 522 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CRB2Q5IJ48 1285 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 INTS6LQ5JSJ4 861 aaKnown RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PSRC1Q6PGN9 363 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 OR6K6Q8NGW6 343 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 CGREF1Q99674 301 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 OXCT2Q9BYC2 517 aaPredicted RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 EIF2B3Q9NR50 452 aaKnown RBP14.17□□□□□ -0.14
PTPRU-204ENST00000428026 SERPINA3P01011 423 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ANXA8P13928 327 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 AVPR1BP47901 424 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 RABL3Q5HYI8 236 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF311Q5JNZ3 666 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PAQR3Q6TCH7 311 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 OR5AK3PQ8NH89 298 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PYCR2Q96C36 320 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 TREM1Q9NP99 234 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 PCDHGB3Q9Y5G1 929 aa14.17□□□□□ -0.14
PTPRU-204ENST00000428026 A0A1W2PQ45 241 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 KANTRA0A1W2PQU2 76 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 A0A1W2PQY0 241 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 TLR4O00206 839 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 INSIG1O15503 277 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 DLX3O60479 287 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 GSTT2BP0CG30 244 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ELK4P28324 431 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 GFOD2Q3B7J2 385 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF627Q7L945 461 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SLC15A3Q8IY34 581 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PEX5LQ8IYB4 626 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 TIFAQ96CG3 184 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 POLR3BQ9NW08 1133 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 MARK1Q9P0L2 795 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SCAMP1O15126 338 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SLC7A4O43246 635 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SNAI1O95863 264 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 TCEA1P23193 301 aaKnown RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ECHS1P30084 290 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PRR23BQ6ZRT6 265 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 GALNT6Q8NCL4 622 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ZFAND2BQ8WV99 257 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PCED1BQ96HM7 432 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 TMEM209Q96SK2 561 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 CNTN3Q9P232 1028 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 WRAP73Q9P2S5 460 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF639Q9UID6 485 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 EOMESO95936 686 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PTX3P26022 381 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PLA2G16P53816 162 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 OLIG2Q13516 323 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF404Q494X3 552 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 KLHL35Q6PF15 583 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ERMP1Q7Z2K6 904 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ZSWIM3Q96MP5 696 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 WRAP53Q9BUR4 548 aaKnown RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 COMMD4Q9H0A8 199 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 CCDC177Q9NQR7 707 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 RASGRP1O95267 797 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 OGNP20774 298 aaKnown RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 EIF2S3P41091 472 aaKnown RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 UFM1P61960 85 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PPP3R1P63098 170 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 LRRC73Q5JTD7 316 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 KIAA0930Q6ICG6 404 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ASB12Q8WXK4 309 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SLC35G5Q96KT7 338 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 PKP4Q99569 1192 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 YIPF4Q9BSR8 244 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
PTPRU-204ENST00000428026 SMURF2Q9HAU4 748 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 IL1RAPQ9NPH3 570 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 TIGARQ9NQ88 270 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 GIMAP2Q9UG22 337 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 MED31Q9Y3C7 131 aa14.16□□□□□ -0.14
PTPRU-204ENST00000428026 ENGP17813 658 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 PRKCHP24723 683 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ARF3P61204 181 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ARF1P84077 181 aaKnown RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 MAB21L1Q13394 359 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 BTBD16Q32M84 506 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 EPGNQ6UW88 154 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SNX29P2Q8IUI4 249 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 C1orf216Q8TAB5 229 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 KXD1Q9BQD3 176 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SEZ6LQ9BYH1 1024 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 YTHDF1Q9BYJ9 559 aaKnown RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 HMGXB4Q9UGU5 601 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 A0A0G2JN53 185 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 PER2O15055 1255 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 NIPSNAP2O75323 286 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 VNN1O95497 513 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms