RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 UGT2B28Q9BY64 529 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 SLC6A13Q9NSD5 602 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 DZANK1Q9NVP4 752 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CD84Q9UIB8 345 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ELOVL7A1L3X0 281 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 G3V2T6 193 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 H3BQ06 376 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 UPK1AO00322 258 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CXCR6O00574 342 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 PRKD3O94806 890 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CLDN9O95484 217 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ANXA5P08758 320 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 BCKDHAP12694 445 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 BMP8BP34820 402 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 SHMT2P34897 504 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ALDH3A2P51648 485 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ADARB1P78563 741 aaKnown RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 CBX3Q13185 183 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 BOP1Q14137 746 aaKnown RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 CCDC85BQ15834 202 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 CDKN3Q16667 212 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 PGS1Q32NB8 556 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ATP13A5Q4VNC0 1218 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CCDC92Q53HC0 331 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 CCNYL2Q5T2Q4 361 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 GPR180Q86V85 440 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 C12orf40Q86WS4 652 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 MSRB3Q8IXL7 192 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ALDH16A1Q8IZ83 802 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 SLC22A15Q8IZD6 547 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ZNF548Q8NEK5 533 aaPredicted RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 SELENOMQ8WWX9 145 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 COPS8Q99627 209 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ACPTQ9BZG2 426 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 NAA50Q9GZZ1 169 aaKnown RBP10.39□□□□□ -0.75
CUX1-205ENST00000425244 ELOVL6Q9H5J4 265 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ZDHHC6Q9H6R6 413 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 C1orf109Q9NX04 203 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ZNF639Q9UID6 485 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 DLGAP4Q9Y2H0 992 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 ATG2BQ96BY7 2078 aa10.39□□□□□ -0.75
CUX1-205ENST00000425244 TRBV5-4A0A0C4DH59 114 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 MTX2O75431 263 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 PDYNP01213 254 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 KRT6AP02538 564 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 KRT6BP04259 564 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 CYP17A1P05093 508 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 ALPLP05186 524 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 IL6P05231 212 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 EBLN1P0CF75 366 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 ADH5P11766 374 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 PABPC1P11940 636 aaKnown RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 CCR7P32248 378 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 MAPK8P45983 427 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 KRT6CP48668 564 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 LYPLAL1Q5VWZ2 237 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 SPESP1Q6UW49 350 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 UBE2R2Q712K3 238 aaPredicted RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 ZBTB46Q86UZ6 589 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 OR2AP1Q8NGE2 309 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 ACDQ96AP0 544 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 TTYH1Q9H313 450 aaPredicted RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 TOR3AQ9H497 397 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 MTG2Q9H4K7 406 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 KCTD5Q9NXV2 234 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 TRPS1Q9UHF7 1281 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 FAF1Q9UNN5 650 aaPredicted RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 U3KQV3 271 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 PABPN1LA6NDY0 278 aaKnown RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 H0Y858 1186 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 SOCS5O75159 536 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 ZNF821O75541 412 aaPredicted RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 ATE1O95260 518 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 IL7RP16871 459 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 ITPKAP23677 461 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 NSG1P42857 185 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 POM121L1PQ3SYA9 428 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 GPR33Q49SQ1 333 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 TMEM215Q68D42 235 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 USP51Q70EK9 711 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 FGF14Q92915 247 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 MYADMQ96S97 322 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 INPP5KQ9BT40 448 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 CLMPQ9H6B4 373 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 HPS4Q9NQG7 708 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 MBD1Q9UIS9 605 aaPredicted RBP10.38□□□□□ -0.75
CUX1-205ENST00000425244 PDE10AQ9Y233 779 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
CUX1-205ENST00000425244 SLC9A3R1O14745 358 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 WDR47O94967 919 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 UGT2B4P06133 528 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 MYCLP1P12525 358 aaPredicted RBP10.37□□□□□ -0.75
CUX1-205ENST00000425244 PRKACGP22612 351 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 S100A3P33764 101 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 SLC6A11P48066 632 aa10.37□□□□□ -0.75
CUX1-205ENST00000425244 Q6ZVU0 165 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms