RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PRKCDQ05655 676 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 AP5B1Q2VPB7 878 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 FAM171A1Q5VUB5 890 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 OR4M2Q8NGB6 313 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 METTL6Q8TCB7 284 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 UTP15Q8TED0 518 aaKnown RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 MCCC1Q96RQ3 725 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 TMEM209Q96SK2 561 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 CCM2Q9BSQ5 444 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 NT5MQ9NPB1 228 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 PPP2R3BQ9Y5P8 575 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 FAM234BA2RU67 622 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 CCDC182A6NF36 153 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 GPR39O43194 453 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 LRRTM2O43300 516 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 OR2B3O76000 313 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 OR7A10O76100 309 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 HNF4AP41235 474 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 HUNKP57058 714 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 DBPQ10586 325 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 SLC14A1Q13336 389 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 DMC1Q14565 340 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 MAPKAPK3Q16644 382 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 TSTQ16762 297 aaKnown RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 SMYD5Q6GMV2 418 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 ZDHHC17Q8IUH5 632 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 TPD52L3Q96J77 140 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 SLC39A8Q9C0K1 460 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 C11orf54Q9H0W9 315 aaPredicted RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 SAMHD1Q9Y3Z3 626 aaKnown RBP11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 COMMD10Q9Y6G5 202 aa11.01□□□□□ -0.65
SEC61A1-202ENST00000424880 GFRA2O00451 464 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ERN1O75460 977 aaKnown RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 LRATO95237 230 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 TNFRSF1BP20333 461 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 MYL9P24844 172 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 SOX3P41225 446 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 CDKN1CP49918 316 aaPredicted RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 OAZ1P54368 228 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ERVK-8P63133 956 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 VLDLRP98155 873 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 IL18R1Q13478 541 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ZNF79Q15937 498 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 C5orf22Q49AR2 442 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ESCO2Q56NI9 601 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 GNASQ5JWF2 1037 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ANKS6Q68DC2 871 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 MSRB3Q8IXL7 192 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 SVOPLQ8N434 492 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 NLGN4YQ8NFZ3 816 aaPredicted RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 HASPINQ8TF76 798 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ZNF566Q969W8 418 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 DPH2Q9BQC3 489 aaPredicted RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 IL1RAPQ9NPH3 570 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 RCOR3Q9P2K3 495 aaPredicted RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 TTC3P53804 2025 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 EFCAB10A6NFE3 127 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 HMX3A6NHT5 357 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 RFXAPO00287 272 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 COL6A1P12109 1028 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 JUNDP17535 347 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 CLCN5P51795 746 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 SMSP52788 366 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 MLLT6P55198 1093 aaPredicted RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 ABRAXAS2Q15018 415 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 POU4F3Q15319 338 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 DDR2Q16832 855 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 COQ5Q5HYK3 327 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 CDH24Q86UP0 819 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 LIX1LQ8IVB5 337 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 SETD9Q8NE22 299 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 TSPAN17Q96FV3 270 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 ATOH8Q96SQ7 321 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 APOL4Q9BPW4 351 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 C1QTNF7Q9BXJ2 289 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 NXF2Q9GZY0 626 aaKnown RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 ADARB2Q9NS39 739 aaKnown RBP11□□□□□ -0.65
SEC61A1-202ENST00000424880 RAPGEFL1Q9UHV5 662 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 MKLN1Q9UL63 735 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 PCDHB5Q9Y5E4 795 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 PEX16Q9Y5Y5 336 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 SIP14410 1827 aa11□□□□□ -0.65
SEC61A1-202ENST00000424880 IQCF5A8MTL0 148 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 WDR47O94967 919 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 GUCA1CO95843 209 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 SERPINF2P08697 491 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 ADORA3P0DMS8 318 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 HCAR3P49019 387 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 RGS6P49758 472 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 SNX16P57768 344 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 ERVPABLB-1P60509 514 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 DSC2Q02487 901 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 FADDQ13158 208 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 CDH18Q13634 790 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 PTPRRQ15256 657 aa10.99□□□□□ -0.65
SEC61A1-202ENST00000424880 UAP1L1Q3KQV9 507 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms