RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 LAPTM4BQ86VI4 370 aa15.95■□□□□ 0.14
CHCHD3-202ENST00000423635 KLHDC8BQ8IXV7 354 aa15.95■□□□□ 0.14
CHCHD3-202ENST00000423635 SUN3Q8TAQ9 357 aa15.95■□□□□ 0.14
CHCHD3-202ENST00000423635 ENKD1Q9H0I2 346 aa15.95■□□□□ 0.14
CHCHD3-202ENST00000423635 C10orf88Q9H8K7 445 aa15.95■□□□□ 0.14
CHCHD3-202ENST00000423635 OR5H15A6NDH6 313 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CTSVO60911 334 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 F10P00742 488 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PSMA3P25788 255 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PSMB4P28070 264 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 GRB7Q14451 532 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 SF1Q15637 639 aaKnown RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 HIBCHQ6NVY1 386 aaPredicted RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CEP97Q8IW35 865 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 RCOR2Q8IZ40 523 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 OR2L8Q8NGY9 312 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 THAP3Q8WTV1 239 aaPredicted RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 TBL1YQ9BQ87 522 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 TINAGQ9UJW2 476 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 KLK4Q9Y5K2 254 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 DNHD1Q96M86 4753 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 LOC102723996A0A087X1L8 192 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 H7C0C1 242 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 APOC4-APOC2K7ER74 178 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 SPOPO43791 374 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 ZRANB2O95218 330 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 APOC2P02655 101 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CD1EP15812 388 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CXCR2P25025 360 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 ATP5OP48047 213 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 EMP2P54851 167 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 VSX2P58304 361 aaPredicted RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 TLE4Q04727 773 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 SYTL3Q4VX76 610 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CNSTQ6PJW8 725 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 BBS12Q6ZW61 710 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PRSS58Q8IYP2 241 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 SLC22A15Q8IZD6 547 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 C2orf73Q8N5S3 287 aaPredicted RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 LMNTD1Q8N9Z9 388 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 STYXQ8WUJ0 223 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CHTF18Q8WVB6 975 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PPP1R2P1Q96PQ5 205 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 TREX2Q9BQ50 279 aaPredicted RBP15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 FERMT1Q9BQL6 677 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 RIC8BQ9NVN3 520 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 STMN3Q9NZ72 180 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 MEMO1Q9Y316 297 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 PCDHGB6Q9Y5F9 930 aa15.94■□□□□ 0.14
CHCHD3-202ENST00000423635 CPAMD8Q8IZJ3 1885 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 NAV3Q8IVL0 2385 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 IDSB3KWA1 339 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 AKR1B10O60218 316 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 CELA2AP08217 269 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 OR56A5P0C7T3 313 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 ICAM2P13598 275 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 AP2B1P63010 937 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 SPARCL1Q14515 664 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 KRTCAP3Q53RY4 240 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 FAAH2Q6GMR7 532 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 FRMPD2BQ6IN97 320 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 ARHGEF18Q6ZSZ5 1173 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 SPPL2CQ8IUH8 684 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 KATNAL2Q8IYT4 538 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 IL17FQ96PD4 163 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 GPAMQ9HCL2 828 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 ZC3H7BQ9UGR2 993 aaKnown RBP15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■■□□□ 13.2
CHCHD3-202ENST00000423635 ALG6Q9Y672 507 aa15.93■□□□□ 0.14
CHCHD3-202ENST00000423635 CACNA1CQ13936 2221 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 NIPBLQ6KC79 2804 aaeCLIP15.92■□□□□ 0.146e-6■■■□□ 17.7
CHCHD3-202ENST00000423635 RASGRF2O14827 1237 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 GPC4O75487 556 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 MBD3O95983 291 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 RPN2P04844 631 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 ITGAMP11215 1152 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 CCR7P32248 378 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 EMP3P54852 163 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 MUM1Q2TAK8 710 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 ABHD17BQ5VST6 288 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 DCUN1D3Q8IWE4 304 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 IMMP1LQ96LU5 166 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 GPR137Q96N19 417 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 ZNF700Q9H0M5 742 aa15.92■□□□□ 0.14
CHCHD3-202ENST00000423635 LOC105369274A0A096LPK9 316 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 LOC102723532A0A0G2JNH3 316 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 MROH6A6NGR9 719 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 DIAPH2O60879 1101 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 FBLP22087 321 aaKnown RBP15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 PMP22Q01453 160 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 EEF1A2Q05639 463 aaKnown RBP15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 PCOLCEQ15113 449 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 LONRF1Q17RB8 773 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 KCTD11Q693B1 232 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 TMEM205Q6UW68 189 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 UNC5DQ6UXZ4 953 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 TAX1BP1Q86VP1 789 aa15.91■□□□□ 0.14
CHCHD3-202ENST00000423635 VRK3Q8IV63 474 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms