RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MYPOPQ86VE0 399 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 KLHDC1Q8N7A1 406 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 SLC4A11Q8NBS3 891 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 DBF4BQ8NFT6 615 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR1L3Q8NH93 324 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 SMAP2Q8WU79 429 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 MOCOSQ96EN8 888 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 THOC1Q96FV9 657 aaKnown RBP3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 MAGED4Q96JG8 741 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 ATOH8Q96SQ7 321 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 CPNE1Q99829 537 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 SYT11Q9BT88 431 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 CLEC7AQ9BXN2 247 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 SLC2A11Q9BYW1 496 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 ANKRD2Q9GZV1 360 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 MAN2C1Q9NTJ4 1040 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 C5AR2Q9P296 337 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 GRID1Q9ULK0 1009 aa3.83□□□□□ -1.8
HMGB1P49-201ENST00000418882 A0A1W2PR80 420 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 MEX3AA1L020 520 aaKnown RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 URADA6NGE7 173 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 CCL24O00175 119 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 IPO8O15397 1037 aaKnown RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ATP5BP06576 529 aaKnown RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 CSN3P07498 182 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZSCAN5DPP0CG00 497 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 CPT2P23786 658 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 CCR10P46092 362 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 LHX1P48742 406 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF75DP51815 510 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 LBX1P52954 281 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 DRP2Q13474 957 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 C9orf152Q5JTZ5 239 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 IQCHQ86VS3 1027 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 HOGA1Q86XE5 327 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 TICAM2Q86XR7 235 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 RAB42Q8N4Z0 105 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ANKRD13CQ8N6S4 541 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 XXYLT1Q8NBI6 393 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 VANGL1Q8TAA9 524 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ARSGQ96EG1 525 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 PGAP3Q96FM1 320 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 OTUB1Q96FW1 271 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF486Q96H40 463 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 FAM71F1Q96KD3 344 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 FEVQ99581 238 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 MIS12Q9H081 205 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ST6GALNAC4Q9H4F1 302 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZDHHC18Q9NUE0 388 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 IL17BQ9UHF5 180 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 RNF215Q9Y6U7 377 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 PCNX3Q9H6A9 2034 aa3.82□□□□□ -1.8
HMGB1P49-201ENST00000418882 H7C423 109 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ARPC2O15144 300 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 GLRA3O75311 464 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 SORBS2O94875 1100 aaKnown RBP3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 SEC24AO95486 1093 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR52Z1P0C646 297 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 DPEP1P16444 411 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 CYP2A7P20853 494 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 CLDN15P56746 228 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 HERV-K104P61576 105 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 CSNK2BP67870 215 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ACSM1Q08AH1 577 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 PTPRCAPQ14761 206 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 TMEM266Q2M3C6 531 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 CRY2Q49AN0 593 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 SLC35D3Q5M8T2 416 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF772Q68DY9 489 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 NAA16Q6N069 864 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZNF613Q6PF04 617 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ZBTB49Q6ZSB9 765 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 LGI2Q8N0V4 545 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 POMGNT2Q8NAT1 580 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 OR13C3Q8NGS6 347 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 APOBEC4Q8WW27 367 aaKnown RBP3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ATL1Q8WXF7 558 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 MOB3AQ96BX8 217 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 WBP1Q96G27 269 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 NECTIN4Q96NY8 510 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 VGLL1Q99990 258 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 DNAJC4Q9NNZ3 241 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ERAP1Q9NZ08 941 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 PAK5Q9P286 719 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 TDRD15B5MCY1 1934 aaKnown RBP3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 ARID2Q68CP9 1835 aa3.81□□□□□ -1.8
HMGB1P49-201ENST00000418882 CASTOR2A6NHX0 329 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 DIAPH2O60879 1101 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CDK2AP2O75956 126 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CSTF2P33240 577 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CAPZA2P47755 286 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CSE1LP55060 971 aaKnown RBP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 PAX9P55771 341 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 UBASH3AP57075 661 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 CUL3Q13618 768 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 GPR33Q49SQ1 333 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 RPUSD3Q6P087 351 aaKnown RBP3.8□□□□□ -1.8
HMGB1P49-201ENST00000418882 LSMEM2Q8N112 164 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms