RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 B3GNTL1Q67FW5 361 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 CHST15Q7LFX5 561 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SNX20Q7Z614 316 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 PHYKPLQ8IUZ5 450 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 CTAGE3PQ8IX95 158 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 GALNT16Q8N428 558 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 GPR26Q8NDV2 337 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 ZNF514Q96K75 400 aaPredicted RBP13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 TRAPPC9Q96Q05 1148 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SLX1AQ9BQ83 275 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SPATA16Q9BXB7 569 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 ASB8Q9H765 288 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 RMI1Q9H9A7 625 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SEMA5BQ9P283 1151 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 SLC24A2Q9UI40 661 aa13.1□□□□□ -0.31
RAPGEF1-204ENST00000414781 ATP8B1O43520 1251 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 SNX2O60749 519 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 NDUFS3O75489 264 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 SCRG1O75711 98 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 SOD1P00441 154 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 VIPP01282 170 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 FOLR1P15328 257 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 XRCC1P18887 633 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 OGNP20774 298 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 MSH2P43246 934 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 ART1P52961 327 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 XIAPP98170 497 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 GPS2Q13227 327 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 PTPRCAPQ14761 206 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 UAP1Q16222 522 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 KBTBD12Q3ZCT8 623 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TEDDM1Q5T9Z0 273 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TRMT10BQ6PF06 316 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 LRIG3Q6UXM1 1119 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 FAM151BQ6UXP7 276 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TAOK1Q7L7X3 1001 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TMEM126BQ8IUX1 230 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 CNTN4Q8IWV2 1026 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TRIM48Q8IWZ4 208 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 RBM12BQ8IXT5 1001 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 CPNE1Q99829 537 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 TRIM56Q9BRZ2 755 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 RIOK2Q9BVS4 552 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 ABCG8Q9H221 673 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 ZNF552Q9H707 407 aaPredicted RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 PLAC1Q9HBJ0 212 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 FGF21Q9NSA1 209 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 CRLS1Q9UJA2 301 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 KCNK6Q9Y257 313 aa13.09□□□□□ -0.31
RAPGEF1-204ENST00000414781 A0A0U1RQS6 177 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 TMEM200CA6NKL6 621 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 ASMTLO95671 621 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 INHBAP08476 426 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 RALBP11234 206 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 ACP5P13686 325 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 CNTFP26441 200 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 ARNTP27540 789 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 ARL4DP49703 201 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 SERPINB9P50453 376 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 CLCNKAP51800 687 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 RASA2Q15283 850 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 HENMT1Q5T8I9 393 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 GRTP1Q5TC63 336 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 ZNF470Q6ECI4 717 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 IRGCQ6NXR0 463 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 XKRXQ6PP77 449 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 FAM180AQ6UWF9 173 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 FAM92BQ6ZTR7 304 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 TRIM74Q86UV6 250 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 CILP2Q8IUL8 1156 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 PPM1NQ8N819 430 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 RSC1A1Q92681 617 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 CCDC120Q96HB5 630 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 COX14Q96I36 57 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 VPS35Q96QK1 796 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 TMEM109Q9BVC6 243 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 EPB41L4BQ9H329 900 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 SMOXQ9NWM0 555 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 CD84Q9UIB8 345 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 FBXO5Q9UKT4 447 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 PADI2Q9Y2J8 665 aa13.08□□□□□ -0.32
RAPGEF1-204ENST00000414781 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
RAPGEF1-204ENST00000414781 AGAP14A8MT82 685 aa13.07□□□□□ -0.32
RAPGEF1-204ENST00000414781 CFAP99D6REC4 459 aa13.07□□□□□ -0.32
RAPGEF1-204ENST00000414781 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
RAPGEF1-204ENST00000414781 MEN1O00255 615 aa13.07□□□□□ -0.32
RAPGEF1-204ENST00000414781 CCL22O00626 93 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms