RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PGAP3Q96FM1 320 aaPredicted RBP6.11□□□□□ -1.43
LSM5-203ENST00000409782 FBXL20Q96IG2 436 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 HSFY1Q96LI6 401 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 GPR78Q96P69 363 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 FYTTD1Q96QD9 318 aaKnown RBP6.11□□□□□ -1.43
LSM5-203ENST00000409782 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 TRIM62Q9BVG3 475 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 ULBP1Q9BZM6 244 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 TRIM2Q9C040 744 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 DCLK3Q9C098 648 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 Q9N2J8 555 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.11□□□□□ -1.43
LSM5-203ENST00000409782 SPHK2Q9NRA0 654 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 ABCF3Q9NUQ8 709 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 MRGBPQ9NV56 204 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 TAB2Q9NYJ8 693 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 WDR35Q9P2L0 1181 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 HAO1Q9UJM8 370 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 GMEB2Q9UKD1 530 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 RAB23Q9ULC3 237 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 SLC8A2Q9UPR5 921 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 BTBD3Q9Y2F9 522 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 ZNF510Q9Y2H8 683 aa6.11□□□□□ -1.43
LSM5-203ENST00000409782 SPAG17Q6Q759 2223 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 USP34Q70CQ2 3546 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MYO15AQ9UKN7 3530 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 USP17L23D6RBM5 183 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 K7EQS6 105 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TULP2O00295 520 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MDM4O15151 490 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MED7O43513 233 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 HCRTR2O43614 444 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 PEX1O43933 1283 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 LRP3O75074 770 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 LATS1O95835 1130 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MBD3O95983 291 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 PENKP01210 267 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 EGR2P11161 476 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 KRT5P13647 590 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 SELLP14151 372 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 NR4A1P22736 598 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 POU1F1P28069 291 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 CORO1AP31146 461 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 CDAP32320 146 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TNFRSF4P43489 277 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 ACADSBP45954 432 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 SLC15A1P46059 708 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 PPP5CP53041 499 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MFAP3P55082 362 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 DAOAP59103 153 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 YWHAZP63104 245 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 KDSRQ06136 332 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TP53BP2Q13625 1128 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 DMC1Q14565 340 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 RNPS1Q15287 305 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 SHBQ15464 509 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 EXOC3L4Q17RC7 722 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 SOWAHCQ53LP3 525 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 RNASE12Q5GAN4 147 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 AARS2Q5JTZ9 985 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 SLC30A9Q6PML9 568 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 GLDNQ6ZMI3 551 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 RBM43Q6ZSC3 357 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 GSTA5Q7RTV2 222 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TRMT11Q7Z4G4 463 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 TMEM25Q86YD3 366 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 FAM217AQ8IXS0 508 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 GHDCQ8N2G8 530 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 PAQR4Q8N4S7 273 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 TERB1Q8NA31 727 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TSTD1Q8NFU3 115 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 OR52N4Q8NGI2 321 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 RNF139Q8WU17 664 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 SLC35F5Q8WV83 523 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 SHC3Q92529 594 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 WBP2Q969T9 261 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 WDFY2Q96P53 400 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 TEFMQ96QE5 360 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 XPO6Q96QU8 1125 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 CRACR2AQ9BSW2 395 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 BBS2Q9BXC9 721 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 NDST4Q9H3R1 872 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 UBE2TQ9NPD8 197 aaPredicted RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 SNTG1Q9NSN8 517 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 DNAJC17Q9NVM6 304 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 C2orf42Q9NWW7 574 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 CPSF2Q9P2I0 782 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 DEC1Q9P2X7 70 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MKLN1Q9UL63 735 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 MMP17Q9ULZ9 603 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 REXO2Q9Y3B8 237 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 HBS1LQ9Y450 684 aaKnown RBP6.1□□□□□ -1.43
LSM5-203ENST00000409782 CFAP54Q96N23 3096 aa6.1□□□□□ -1.43
LSM5-203ENST00000409782 LOC100509620A0A075B734 347 aa6.09□□□□□ -1.43
LSM5-203ENST00000409782 PIPSLA2A3N6 862 aa6.09□□□□□ -1.43
LSM5-203ENST00000409782 YJEFN3A6XGL0 299 aa6.09□□□□□ -1.43
LSM5-203ENST00000409782 E7ENQ6 273 aa6.09□□□□□ -1.43
LSM5-203ENST00000409782 H0Y626 953 aa6.09□□□□□ -1.43
LSM5-203ENST00000409782 H0YIZ8 118 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms