RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SLC35F5Q8WV83 523 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 OSGEPL1Q9H4B0 414 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 MAU2Q9Y6X3 613 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 DCCP43146 1447 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 MYH2Q9UKX2 1941 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 OR51F1A6NGY5 319 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 G3V2L1 256 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 SLC9A3R1O14745 358 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 ERAL1O75616 437 aaKnown RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GJA9P57773 515 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GALNT2Q10471 571 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 SETMARQ53H47 684 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PIAS4Q8N2W9 510 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 FAM46DQ8NEK8 389 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 ACDQ96AP0 544 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 MROQ9BYG7 248 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 AIG1Q9NVV5 245 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GLYATL1P3A0A0U1RQE8 302 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GUCA1AP43080 201 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PNLIPRP1P54315 467 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GALNT1Q10472 559 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 TAF1AQ15573 450 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 FOXB2Q5VYV0 432 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 LINGO2Q7L985 606 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 DNAJA4Q8WW22 397 aaPredicted RBP17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GPR20Q99678 358 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GNAO1P09471 354 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PCSK6P29122 969 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 OR4D2P58180 307 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 TSPAN5P62079 268 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 SMCO1Q147U7 214 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 DUOXA1Q1HG43 343 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PAMR1Q6UXH9 720 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 OR6Q1Q8NGQ2 317 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 RHOXF1Q8NHV9 184 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 UROC1Q96N76 676 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 GON7Q9BXV9 100 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 HCN4Q9Y3Q4 1203 aa17.26■□□□□ 0.35
SMPD4-202ENST00000409031 AXIN1O15169 862 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CLDN11O75508 207 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CDK14O94921 469 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 SERPINA3P01011 423 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 DNASE1P24855 282 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MAPK9P45984 424 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 LEPRP48357 1165 aaKnown RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 GRB7Q14451 532 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF234Q14588 700 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CRB2Q5IJ48 1285 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 DUS1LQ6P1R4 473 aaKnown RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PIM3Q86V86 326 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ZSWIM9Q86XI8 627 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CNDP2Q96KP4 475 aaKnown RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ALPK1Q96QP1 1244 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ENAMQ9NRM1 1142 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 FKBPLQ9UIM3 349 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PCDHGA11Q9Y5H2 935 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PPP2R3BQ9Y5P8 575 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 KANTRA0A1W2PQU2 76 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 C7orf72A4D263 438 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 AGAP5A6NIR3 686 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 HLA-DQB2P05538 268 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CPN2P22792 545 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 SCARB2Q14108 478 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CILP2Q8IUL8 1156 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 TIGD4Q8IY51 512 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 OR10Q1Q8NGQ4 319 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 HMCESQ96FZ2 354 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MYO19Q96H55 970 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 LRCH3Q96II8 777 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 FUZQ9BT04 418 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MAGIXQ9H6Y5 334 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PIGVQ9NUD9 493 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PCDHGB5Q9Y5G0 923 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 WWP2O00308 870 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 HOXA2O43364 376 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 LRG1P02750 347 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF311Q5JNZ3 666 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ING5Q8WYH8 240 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CDKN2AIPNLQ96HQ2 116 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MAELQ96JY0 434 aaKnown RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 SLC29A3Q9BZD2 475 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 UCK2Q9BZX2 261 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ATG10Q9H0Y0 220 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 C3orf14Q9HBI5 128 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 HEMK1Q9Y5R4 338 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 MYH7P12883 1935 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CCL15-CCL14A0A0B4J2E2 113 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 PAPSS2O95340 614 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 EPHB3P54753 998 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 EIF5AP63241 154 aaKnown RBP17.25■□□□□ 0.35
SMPD4-202ENST00000409031 CCL15Q16663 113 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ARHGAP15Q53QZ3 475 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 SYPL2Q5VXT5 272 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 ZNF438Q7Z4V0 828 aa17.25■□□□□ 0.35
SMPD4-202ENST00000409031 VWA5B2Q8N398 1253 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms