RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 OR51F1A6NGY5 319 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 AGAP14A8MT82 685 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 GOLGA8MH3BSY2 632 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PYCARD-AS1I3L0S3 204 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 TK2O00142 265 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 RAD1O60671 282 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 FAM87AP0C7U9 286 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 NAGAP17050 411 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 AMD1P17707 334 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 MC4RP32245 332 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 GRIA1P42261 906 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 SKIV2L2P42285 1042 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 SEC24CP53992 1094 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 AP2B1P63010 937 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 OCRLQ01968 901 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 GUCY2DQ02846 1103 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 KCNAB1Q14722 419 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 MAPRE2Q15555 327 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 OASLQ15646 514 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PARP6Q2NL67 630 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 SPATA24Q86W54 205 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 SNX32Q86XE0 403 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PLXDC1Q8IUK5 500 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 CADM3Q8N126 398 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 NXPE1Q8N323 547 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PPFIBP2Q8ND30 876 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 ARL8AQ96BM9 186 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PPM1MQ96MI6 270 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 ERP44Q9BS26 406 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 ZCCHC2Q9C0B9 1178 aaKnown RBP9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 RAB17Q9H0T7 212 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 CRLS1Q9UJA2 301 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 CFL2Q9Y281 166 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 PCDHB11Q9Y5F2 797 aa9.41□□□□□ -0.9
NIF3L1-202ENST00000409020 COL6A6A6NMZ7 2263 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 IGHV5-51A0A0C4DH38 117 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 LOC101059948A0A1B0GTJ6 334 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ANKRD34BA5PLL1 514 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 LIASO43766 372 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 TSPAN9O75954 239 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 STK17BO94768 372 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ZIC2O95409 532 aaPredicted RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 TIAF1O95411 115 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 CRTAMO95727 393 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 AP2A1O95782 977 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 KRT6AP02538 564 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 KRT6BP04259 564 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 POLBP06746 335 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ANKRD34CP0C6C1 535 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ZSCAN5DPP0CG00 497 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 MTHFD1P11586 935 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 VCLP18206 1134 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 CD82P27701 267 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 MSH2P43246 934 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ARCN1P48444 511 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 EMP3P54852 163 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 FOXM1Q08050 763 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM214Q6NUQ4 689 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 SNX20Q7Z614 316 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 TREML1Q86YW5 311 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 CFAP206Q8IYR0 622 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 CLDN19Q8N6F1 224 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 IL22RA1Q8N6P7 574 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 OR52K1Q8NGK4 314 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 OR2L2Q8NH16 312 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ANGPTL6Q8NI99 470 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 FERMT1Q9BQL6 677 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ASPSCR1Q9BZE9 553 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 XAB2Q9HCS7 855 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 FBXO8Q9NRD0 319 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 MRGBPQ9NV56 204 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 ARMC1Q9NVT9 282 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 MRPS18BQ9Y676 258 aaKnown RBP9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 PRSS21Q9Y6M0 314 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 HECTD1Q9ULT8 2610 aa9.4□□□□□ -0.9
NIF3L1-202ENST00000409020 SH3PXD2BA1X283 911 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 MGAT4DA6NG13 374 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CENPBD1B2RD01 187 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 POLR1CO15160 346 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 DLGAP3O95886 979 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 DDX5P17844 614 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 F8A1P23610 371 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 PHBP35232 272 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CCNFP41002 786 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CENPAP49450 140 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ATP1A2P50993 1020 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ARFIP2P53365 341 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 C19orf57Q0VDD7 668 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SIX1Q15475 284 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 TBR1Q16650 682 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ZNF658BQ4V348 819 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 BCL7AQ4VC05 210 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ZRANB3Q5FWF4 1079 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 ATP1A1-AS1Q5TC04 95 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 CACHD1Q5VU97 1274 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 NAPRTQ6XQN6 538 aa9.39□□□□□ -0.91
NIF3L1-202ENST00000409020 SERPINA9Q86WD7 417 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms